Data from: Convergent evolution of alternative developmental trajectories associated with diapause in African and South American killifish

Furness AI, Reznick DN, Springer MS, Meredith RW

Date Published: December 30, 2014

DOI: http://dx.doi.org/10.5061/dryad.hj68b

 

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Title Killifish DNA alignment file
Downloaded 24 times
Description DNA alignment file. 311 taxa. 10960 bp. Phylip format.
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Title Killifish DNA partition file
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Description Text file indicating DNA data partitions.
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Title RAxML_bipartitions
Downloaded 18 times
Description Killifish RAxML tree with bootstrap values.
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Title Killifish timetree (Auto, Soft)
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Description Killifish timetree generated with MCMCTree program in PAML 4.5. Autocorrelated rates, soft-bounded constraints.
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Title Killifish timetree (IR, Soft)
Downloaded 8 times
Description Killifish timetree generated with MCMCTree program in PAML 4.5. Independent rates, soft-bounded constraints.
Download KillifishIRsoftResults.tree (14.49 Kb)
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Title Killifish timetree (Auto, Hard)
Downloaded 10 times
Description Killifish timetree generated with MCMCTree program in PAML 4.5. Autocorrelated rates, hard-bounded constraints.
Download KillifishResultsAutoHard.tree (14.49 Kb)
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Title Killifish timetree (IR, Hard)
Downloaded 9 times
Description Killifish timetree generated with MCMCTree program in PAML 4.5. Independent rates, hard-bounded constraints.
Download KillifishResultsIRhard.tree (14.49 Kb)
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Title Embryo developmental pathway data set
Downloaded 51 times
Description Data set documenting morphological and physiological divergence along alternative developmental pathways in annual killifish.
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Title Nothobranchius furzeri embryo metabolic rate
Downloaded 30 times
Description Rate of oxygen consumption (metabolic rate) in Nothobranchius furzeri embryos over the course of development.
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Title Nothobranchius furzeri long-term embryo survival
Downloaded 31 times
Description Data on long-term survival as a function of developmental pathway in Nothobranchius furzeri embryos.
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When using this data, please cite the original publication:

Furness AI, Reznick DN, Springer MS, Meredith RW (2015) Convergent evolution of alternative developmental trajectories associated with diapause in African and South American killifish. Proceedings of the Royal Society B 282(1802): 20142189. http://dx.doi.org/10.1098/rspb.2014.2189

Additionally, please cite the Dryad data package:

Furness AI, Reznick DN, Springer MS, Meredith RW (2015) Data from: Convergent evolution of alternative developmental trajectories associated with diapause in African and South American killifish. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.hj68b
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