Data from: Genomic survey provides insights on the evolutionary changes during invasive European expansion of the mosquitofish (Gambusia holbrooki)

Vera M, Diez-del-Molino D, Garcia-Marin JL

Date Published: January 26, 2017

DOI: http://dx.doi.org/10.5061/dryad.j059v

 

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Title Description of the files deposited in Dryad Vera et al
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Description Description of the files deposited in Dryad Vera et al for the mansucript "Genomic survey provides insights on the evolutionary changes during invasive European expansion of the mosquitofish (Gambusia holbrooki)"
Download Description_of_files _deposited_Dryad_Ver...al.txt (1.303 Kb)
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Title All1Gamb
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Description Genepop input file created by populations including all the markers used in the study
Download All1Gamb.txt (5.035 Mb)
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Title ADGamb
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Description Genepop input file created by Populations. Only markers included in Anonymous Database (AD).
Download ADGamb.txt (4.913 Mb)
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Title GDGamb
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Description Genepop input file created by Populations. Only markers included in Associated-to-Genes Database (GD).
Download GDGamb.txt (124.4 Kb)
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Title BLAST90_mRNA
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Description BLASTN output file for the VM43 RADtags matching against the Xyphophorus maculatus mRNA sequences retrieved from GenBank using a word size of 90(BLAST90_mRNA.txt).
Download BLAST90_mRNA.txt (4.126 Mb)
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Title X_mac_mRNA
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Description X_mac_mRNA.fasta: Fasta file including the Xyphophorus maculatus mRNA sequences retrieved from Ensembl (23,236 sequences) used for BLASTN analyses.
Download X_mac_mRNA.fasta (50.75 Mb)
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Title BayeScanGamb
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Download BayeScanGamb.zip (145.8 Mb)
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Title PRJNA301984
Downloaded 1 time
Description Link out to NCBI PRJNA301984. Gambusia holbrooki raw sequence reads. 93 sequence files (.bam files. One file per analysed individual. Each individual is identified with a number and the belonging population code shown on Table 1)
Download ../bioproject/?term=PRJNA301984 (0 bytes)
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When using this data, please cite the original publication:

Vera M, Díez-del-Molino D, García-Marín J (2016) Genomic survey provides insights into the evolutionary changes that occurred during European expansion of the invasive mosquitofish (Gambusia holbrooki). Molecular Ecology 25(5): 1089-1105. http://dx.doi.org/10.1111/mec.13545

Additionally, please cite the Dryad data package:

Vera M, Diez-del-Molino D, Garcia-Marin JL (2016) Data from: Genomic survey provides insights on the evolutionary changes during invasive European expansion of the mosquitofish (Gambusia holbrooki). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.j059v
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