Data from: Characterisation of microsatellite and SNP markers from Miseq and genotyping-by-sequencing data among parapatric Urophora cardui (Tephritidae) populations

Johannesen J, Fabritzek AG, Ebner B, Bikar S

Date Published: August 19, 2017

DOI: https://doi.org/10.5061/dryad.j1828

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Title peerj-16427-Uc_GBS_14-6_Structure
Downloaded 11 times
Description Structure file (1492 unlinked SNPs) generated by pyRAD for parameter set 14-6 (14 “minimum coverage of individuals” (mincov) and 6 “maximum number of heterozygote samples” (maxSH). The file contains data from N=18 individuals sampled in three parapatric U. cardui populations (each N=6).
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Title peerj-16427-Uc_GBS_14-6.vcf.xlsx
Downloaded 17 times
Description GBS loci and genotypes recovered with pyRAD from parameter set 14-6 (mincov = 14, maxSH = 6).
Download peerj-16427-Uc_GBS_14-6.vcf.xlsx (419.1 Kb)
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Title Uc_microsats_Genepop
Downloaded 7 times
Description Genepop file. Genetic variation at 12 microsatellite loci in three parapatric U. cardui populations. N=59.
Download Uc_microsats_Genepop.txt (5.968 Kb)
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When using this data, please cite the original publication:

Johannesen J, Fabritzek AG, Ebner B, Bikar S (2017) Characterisation of microsatellite and SNP markers from Miseq and genotyping-by-sequencing data among parapatric Urophora cardui (Tephritidae) populations. PeerJ 5: e3582. https://doi.org/10.7717/peerj.3582

Additionally, please cite the Dryad data package:

Johannesen J, Fabritzek AG, Ebner B, Bikar S (2017) Data from: Characterisation of microsatellite and SNP markers from Miseq and genotyping-by-sequencing data among parapatric Urophora cardui (Tephritidae) populations. Dryad Digital Repository. https://doi.org/10.5061/dryad.j1828
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