Data from: Lepidostroma vilgalysii, a new basidiolichen from the New World

Hodkinson BP, Uehling JK, Smith ME

Date Published: January 9, 2012

DOI: http://dx.doi.org/10.5061/dryad.j1g5dh23

 

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Title Lepidostroma_RAxML_analyses
Downloaded 91 times
Description Input and output files for backbone-constrained topological and bootstrap searches performed with RAxML.
Download Lepidostroma_RAxML_analyses.zip (108.8 Kb)
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Title sequence_renamer
Downloaded 64 times
Description A Perl script written primarily to take fasta files downloaded from GenBank and transform the complex sequence identifiers to a standardized format as follows: Genus_species_GenBankAccNum_GenInfoId
Download sequence_renamer.pl (1.262 Kb)
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Title Lepidostroma_LSU
Downloaded 68 times
Description Full nuclear ribosomal LSU alignment for the data matrix that was analyzed phylogenetically, including exclusion sets, the backbone constraint tree, and the best RAxML tree resulting from the ML analyses.
Download Lepidostroma_LSU.nex (267.1 Kb)
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When using this data, please cite the original publication:

Hodkinson BP, Uehling JK, Smith ME (2012) Lepidostroma vilgalysii, a new basidiolichen from the New World. Mycological Progress 11(3): 827-833. http://dx.doi.org/10.1007/s11557-011-0800-z

Additionally, please cite the Dryad data package:

Hodkinson BP, Uehling JK, Smith ME (2012) Data from: Lepidostroma vilgalysii, a new basidiolichen from the New World. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.j1g5dh23
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