Data from: Signals of heterogeneous selection at an MHC locus in geographically proximate ecotypes of sockeye salmon

Larson WA, Seeb JE, Dann TH, Schindler DE, Seeb LW

Date Published: October 2, 2014

DOI: http://dx.doi.org/10.5061/dryad.j9v4p

 

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Title genotypes for 90 neutral SNPs for 27 populations
Downloaded 43 times
Description A genepop file containing the genotypes for 88 neutral SNPs from 27 populations. Three mitochondrial SNPs (One_CO1, One_Cytb_17, and One_Cytb_26) were phenotyped according to the methods of Habicht et al. (2010). SNP names correspond to those found in Dann et al. (2012, http://www.adfg.alaska.gov/FedAidpdfs/sp12-12.pdf). Population codes are found in the readme file.
Download wr_88_snps_27_pops_genepop.txt (1.176 Mb)
Download README.xlsx (10.26 Kb)
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Title MHC genotypes for 27 populations
Downloaded 45 times
Description Genepop file of MHC genotypes for 27 populations. Genotypes are coded as haplotypes 1-27 based on the order they were discovered. For example haplotype L1-16 in the manuscript would be coded with a 16 in this file. A description of the haplotypes including their sequence can be found in Table S1 of the manuscript. The readme file for this data file includes information on population abbreviations.
Download MHC_genotypes_WR_27_pops_genepop.txt (26.8 Kb)
Download README.xlsx (10.14 Kb)
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When using this data, please cite the original publication:

Larson WA, Seeb JE, Dann TH, Schindler DE, Seeb LW (2014) Signals of heterogeneous selection at an MHC locus in geographically proximate ecotypes of sockeye salmon. Molecular Ecology 23(22): 5448-5461. http://dx.doi.org/10.1111/mec.12949

Additionally, please cite the Dryad data package:

Larson WA, Seeb JE, Dann TH, Schindler DE, Seeb LW (2014) Data from: Signals of heterogeneous selection at an MHC locus in geographically proximate ecotypes of sockeye salmon. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.j9v4p
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