Data from: High degree of cryptic population differentiation in the Baltic Sea herring Clupea harengus

 

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Title SequenceData
Downloaded 61 times
Description Raw sequence data and pileups
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Title SNP matrix
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Description SNP matrix produced from the .vcf genotype calling file by VCFTOOLS
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Title allSNP
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Description SNP data (5985 SNPs in total) discovered from both herring populations in vcf 4.1 format
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Title fixed_loci_index
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Description Fixed loci (1567 in total) on distinct alleles in the two sample locations. Each element in this file is an index of a SNP in "allSNP.vcf".
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Title herring_details
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Description Office 2010 excel format table of details concerning the BLAST analysis for the study "High degree of cryptic population differentiation in the Baltic Sea herring Clupea harengus". The table columns include "RAD_id", "Reference", "E-value", "Similarity" and "Sample sequence in FASTA". The calculated values are collected with Blast2GO program. For additional descriptions, see README.txt.
Download herring_details.xlsx (22.09 Kb)
Download README.txt (714 bytes)
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When using this data, please cite the original publication:

Corander J, Majander K, Cheng L, Merilä J (2013) High degree of cryptic population differentiation in the Baltic Sea herring Clupea harengus. Molecular Ecology 22(11): 2931–2940. http://dx.doi.org/10.1111/mec.12174

Additionally, please cite the Dryad data package:

Corander J, Majander K, Cheng L, Merilä J (2012) Data from: High degree of cryptic population differentiation in the Baltic Sea herring Clupea harengus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.jr56h
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