Data from: Lessons from genome skimming of arthropod-preserving ethanol

Linard B, Arribas P, Andújar C, Crampton-Platt A, Vogler AP

Date Published: May 26, 2016

DOI: http://dx.doi.org/10.5061/dryad.jr6r5

 

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Title Aquatic Ethanol (AE) Metagenome (Illumina reads)
Downloaded 8 times
Description Illumina reads after quality control with Trimmomatic and Printseq (data generation and protocols described in the manuscript). Reads in fasta format.
Download mod_3AWB.qc.fasta.gz (148.6 Mb)
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Title Terrestrial Ethanol (TE) Metagenome (Illumina reads)
Downloaded 9 times
Description Illumina reads after quality control with Trimmomatic and Printseq (data generation and protocols described in the manuscript). Reads in fasta format.
Download mod_run3_4AGB.qc.fasta.gz (180.5 Mb)
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Title Terrestrial Voucher (TV) Metagenome (Illumina reads)
Downloaded 7 times
Description Illumina reads after quality control with Trimmomatic and Printseq (data generation and protocols described in the manuscript). Reads in fasta format.
Download mod_2VGB.qc.fasta.gz (838.6 Mb)
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Title Aquatic Voucher PART 1 (AV) Metagenome (Illumina reads)
Downloaded 5 times
Description Illumina reads after quality control with Trimmomatic and Printseq (data generation and protocols described in the manuscript). Reads in fasta format. # this archive was split in 2 files with the unix command $ gzip -c my_large_file | split -b 1024MiB - myfile_split.gz_ # to uncompress, use $ cat myfile_split.gz_* | gunzip -c > my_large_file # to uncompress in windows (ensure file parts are in correct order) $ copy /b file_aa + file_ab + file_ac + file_ad filetogether
Download mod_1VWB.qc.fasta.gz_aa (1.073 Gb)
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Title Aquatic Voucher PART 2 (AV) Metagenome (Illumina reads)
Downloaded 3 times
Description Illumina reads after quality control with Trimmomatic and Printseq (data generation and protocols described in the manuscript). Reads in fasta format. # this archive was split in 2 files with the unix command $ gzip -c my_large_file | split -b 1024MiB - myfile_split.gz_ # to uncompress, use $ cat myfile_split.gz_* | gunzip -c > my_large_file # to uncompress in windows (ensure file parts are in correct order) $ copy /b file_aa + file_ab + file_ac + file_ad filetogether
Download mod_1VWB.qc.fasta.gz_ab (1.040 Gb)
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When using this data, please cite the original publication:

Linard B, Arribas P, Andújar C, Crampton-Platt A, Vogler AP (2016) Lessons from genome skimming of arthropod-preserving ethanol. Molecular Ecology Resources 16(6): 1365–1377. http://dx.doi.org/10.1111/1755-0998.12539

Additionally, please cite the Dryad data package:

Linard B, Arribas P, Andújar C, Crampton-Platt A, Vogler AP (2016) Data from: Lessons from genome skimming of arthropod-preserving ethanol. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.jr6r5
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