Data from: Functional genomic analysis of corals from natural CO2-seeps reveals core molecular responses involved in acclimatization to ocean acidification

Kenkel CD, Moya A, Strahl J, Humphrey C, Bay LK

Date Published: July 28, 2017

DOI: http://dx.doi.org/10.5061/dryad.k57p6

 

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Title Photographs of sampled corals
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Description Photographs were taken at the time of collection. Image file name indicates coral colony number corresponding to raw TagSeq reads. Labels within images contain date/time/GPS information.
Download MilneBayCollections_Small.zip (8.818 Mb)
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Title R script for DESeq analyses and tables of read counts
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Description Annotated R script for replicating DESeq analyses as described in the linked publication. Input files are tables of TagSeq read counts for host and symbionts, post-quality trimming and mapping to the Acropora millepora and Symbiodinium clade C reference transcriptomes, respectively.
Download RscriptInputFiles.zip (2.668 Mb)
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When using this data, please cite the original publication:

Kenkel CD, Moya A, Strahl J, Humphrey C, Bay LK (2017) Functional genomic analysis of corals from natural CO2 -seeps reveals core molecular responses involved in acclimatization to ocean acidification. Global Change Biology, online in advance of print. http://dx.doi.org/10.1111/gcb.13833

Additionally, please cite the Dryad data package:

Kenkel CD, Moya A, Strahl J, Humphrey C, Bay LK (2017) Data from: Functional genomic analysis of corals from natural CO2-seeps reveals core molecular responses involved in acclimatization to ocean acidification. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.k57p6
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