Data from: Small RNAs from a big genome: the piRNA pathway and transposable elements in the salamander species Desmognathus fuscus

Madison-Villar MJ, Sun C, Lau NC, Settles ML, Mueller RL

Date Published: October 31, 2016

DOI: http://dx.doi.org/10.5061/dryad.kv57r

 

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Title ASZ1.nex alignment
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Description Nexus file containing the trimmed alignment of amino acid sequences from salamanders and other vertebrates used to generate the phylogeny in the manuscript.
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Title Ddx4.nex alignment
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Title FKBP6.nex alignment
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Title Hen1.nex alignment
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Download Hen1.nex (11.69 Kb)
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Title KIF17.nex alignment
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Title Mov10l1.nex alignment
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Title Piwil1.nex alignment
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Title Piwil2.nex alignment
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Title Pld6.nex alignment
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Title Prmt5.nex alignment
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Download Prmt5.nex (18.06 Kb)
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Title Tdrd1.nex alignment
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Download Tdrd1.nex (31.40 Kb)
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Title Tdrkh.nex alignment
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Download Tdrkh.nex (12.28 Kb)
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Title Cryptobranchus pRNA proteins
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Description Amino acid sequences for the 12 Cryptobranchus alleganiensis piRNA pathway proteins.
Download Cryptobranchus_pRNA_proteins.txt (9.429 Kb)
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When using this data, please cite the original publication:

Madison-Villar MJ, Sun C, Lau NC, Settles ML, Mueller RL (2016) Small RNAs from a Big Genome: The piRNA Pathway and Transposable Elements in the Salamander Species Desmognathus fuscus. Journal of Molecular Evolution 83(3-4): 126-136. http://dx.doi.org/10.1007/s00239-016-9759-3

Additionally, please cite the Dryad data package:

Madison-Villar MJ, Sun C, Lau NC, Settles ML, Mueller RL (2016) Data from: Small RNAs from a big genome: the piRNA pathway and transposable elements in the salamander species Desmognathus fuscus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.kv57r
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