Data from: Extending RAD tag analysis to microbial ecology: a comparison between multi locus sequence typing (MLST) and 2b-RAD to investigate Listeria monocytogenes genetic structure

Pauletto M, Carraro L, Babbucci M, Lucchini R, Bargelloni L, Cardazzo B

Date Published: November 25, 2015

DOI: http://dx.doi.org/10.5061/dryad.m1bm5

 

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Title 2bRAD_Listeria_ package_Pauletto
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Description It contains a copy of Structure and Phyloviz input files exactly as used for this paper. In addition it includes Stacks and Panseq output files and provides the files required for performing an integrated analysis of additional L. monocytogenes isolates, as described in the supplemental figure S2.
Download 2bRAD_Listeria_ package_Pauletto.zip (1.546 Mb)
Download README.txt (7.113 Kb)
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When using this data, please cite the original publication:

Pauletto M, Carraro L, Babbucci M, Lucchini R, Bargelloni L, Cardazzo B (2015) Extending RAD tag analysis to microbial ecology: a comparison between multi locus sequence typing (MLST) and 2b-RAD to investigate Listeria monocytogenes genetic structure. Molecular Ecology Resources 16(3): 823-835. http://dx.doi.org/10.1111/1755-0998.12495

Additionally, please cite the Dryad data package:

Pauletto M, Carraro L, Babbucci M, Lucchini R, Bargelloni L, Cardazzo B (2015) Data from: Extending RAD tag analysis to microbial ecology: a comparison between multi locus sequence typing (MLST) and 2b-RAD to investigate Listeria monocytogenes genetic structure. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.m1bm5
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