Data from: Using more than the oldest fossils: dating Osmundaceae with three Bayesian clock approaches

Grimm GW, Kapli P, Bomfleur B, Mcloughlin S, Renner SS

Date Published: December 17, 2014

DOI: http://dx.doi.org/10.5061/dryad.m6t1m

 

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Title Main matrices and dating results
Downloaded 59 times
Description This archive includes the basic matrix files and the main result files of the various dating analyses. For a comprehensive phylogenetic analyses of these data, see Benjamin Bomfleur, Guido W Grimm, Stephen McLoughlin (2014) Osmunda pulchella sp. nov. from the Jurassic of Sweden—reconciling molecular and fossil evidence in the phylogeny of Osmundaceae. bioRxiv, doi: http://dx.doi.org/10.1101/005777.
Download Matrices&Trees.zip (102.9 Kb)
Download README.txt (1.754 Kb)
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Title Figure S1
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Description The ML tree for Osmundaceae from the same data as used for the tree in Fig. 1 with bootstrap support at the nodes.
Download FigS1_Tree_from_Fig_with_support.pdf (111.2 Kb)
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Title Figure S2
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Description Chronograms obtained with the FBD approach and 19 fossil rhizomes or 17 fossil fronds, and with the TE approach and 19 fossil rhizomes.
Download FigS2_subset_analyses UPDATED.pdf (177.5 Kb)
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Title TableS1_FossilListForDating
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Description Fossils of modern Osmundaceae used in the analyses.
Download TableS1_FossilListForDating_NEW.ods (8.039 Kb)
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Title Table S2
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Description List of all osmundaceous frond fossils evaluated.
Download TableS2_Fossil_record_compressions.ods (8.834 Kb)
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Title Table S3
Downloaded 44 times
Description Divergence times with 95% highest posterior densities obtained from the fossilized birth-death (FBD) approach, node dating (ND) with oldest fossils, and total evidence (TE), using all 36 fossils, only the 19 fossil rhizomes, or only the 17 fossil fronds.
Download TableS3_ComparisonDatingResults.pdf (85.27 Kb)
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Title Table S4
Downloaded 40 times
Description Full results of the resampling analyses.
Download TableS4_ResamplingResults.pdf (544.1 Kb)
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When using this data, please cite the original publication:

Grimm GW, Kapli P, Bomfleur B, Mcloughlin S, Renner SS (2015) Using more than the oldest fossils: dating Osmundaceae with three Bayesian clock approaches. Systematic Biology 64(3): 396-405. http://dx.doi.org/10.1093/sysbio/syu108

Additionally, please cite the Dryad data package:

Grimm GW, Kapli P, Bomfleur B, Mcloughlin S, Renner SS (2014) Data from: Using more than the oldest fossils: dating Osmundaceae with three Bayesian clock approaches. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.m6t1m
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