Data from: Phylogeny, traits and biodiversity of a neotropical bat assemblage: close relatives show similar responses to local deforestation

Frank HK, Frishkoff LO, Mendenhall CD, Daily GC, Hadly EA

Date Published: March 20, 2017

DOI: http://dx.doi.org/10.5061/dryad.mb552

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Array of Costa Rican bat capture data
Downloaded 8 times
Description Capture data collected from the field and arranged in an R data array. Array includes: (1) the capture array (X), with the site, year, visit and species information; (2) matrix of the number of visits conducted at each site by year combination (nrep); (3) the pairwise distance between sites (D); (4) scaled and centered proportion of area covered by trees across all spatial scales; see full model explanation (Env); (5) relative elevation of site compared to surroundings (terrain); (6) whether or not the site was a coffee field (coffee.dummy)
Download array.rdata (384.8 Kb)
Details View File Details
Title Full occupancy model with traits
Downloaded 8 times
Description R and JAGS code for the full phylogenetic occupancy model with influence of traits included
Download model_with_trait_for_supplement.R (4.056 Kb)
Details View File Details
Title Full occupancy model without traits
Downloaded 6 times
Description R and JAGS code for the full occupancy model not including traits as an explanatory variable
Download model_notrait_for_supplement.R (4.37 Kb)
Details View File Details

When using this data, please cite the original publication:

Frank HK, Frishkoff LO, Mendenhall CD, Daily GC, Hadly EA (2017) Phylogeny, traits and biodiversity of a neotropical bat assemblage: close relatives show similar responses to local deforestation. The American Naturalist 190(2): 200-212. http://dx.doi.org/10.1086/692534

Additionally, please cite the Dryad data package:

Frank HK, Frishkoff LO, Mendenhall CD, Daily GC, Hadly EA (2017) Data from: Phylogeny, traits and biodiversity of a neotropical bat assemblage: close relatives show similar responses to local deforestation. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.mb552
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: