Data from: Who shares? Who doesn’t? Factors associated with openly archiving raw research data

Piwowar HA

Date Published: May 26, 2011

DOI: http://dx.doi.org/10.5061/dryad.mf1sd

 

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Title Microarray publications and publication attributes
Downloaded 1760 times
Description 157 columns of attributes for 11603 publications identified as creating gene expression microarray data. Tab delimited. Key: PubMed identifier (pmid). See stats.R for data cleaning steps and more details on variables. Data collected in January 2010 using code available at http://github.com/hpiwowar/pypub
Download rawdata.txt (7.639 Mb)
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Title Journal policy details for microarray data
Downloaded 135 times
Description Data sharing policy details for journals that publish a lot of gene expression microarray data. Policy links, excerpts, and classifications (24 columns) for 156 journals. Some of these classifications are included as columns in rawdata.txt as journal policy attributes.
Download journal_policies_microarray_data.csv (345.8 Kb)
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Title Statistical analysis R script
Downloaded 181 times
Description R script for data cleaning, statistical analysis, and graphics as presented in the paper. Takes rawdata.txt as input and loads helper_functions.R source.
Download stats.R (54.34 Kb)
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Title Helper R script functions
Downloaded 310 times
Description Helper functions loaded by stats.R for analysis and graphical output.
Download helper_functions.R (39.70 Kb)
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When using this data, please cite the original publication:

Piwowar HA (2011) Who shares? Who doesn’t? Factors associated with openly archiving raw research data. PLoS ONE 6(7): e18657. http://dx.doi.org/10.1371/journal.pone.0018657

Additionally, please cite the Dryad data package:

Piwowar HA (2011) Data from: Who shares? Who doesn’t? Factors associated with openly archiving raw research data. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.mf1sd
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