Data from: Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos)

Momigliano P, Harcourt R, Robbins WD, Jaiteh V, Mahardika GN, Sembiring A, Stow A

Date Published: March 15, 2017

DOI: http://dx.doi.org/10.5061/dryad.mt2m3

 

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Title DArT_Loci_Information_(Momigliano_et_al_2017)
Downloaded 3 times
Description Information on DArT loci genotyped in this study, including locus sequences for both alleles, read depth, genotype reproducibility and heterozygosity.
Download DArT_Loci_Information_(Momigliano_et_al_2017).xlsx (669.5 Kb)
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Title Genotypes_of_All_Loci_Excluding_8_outliers_(Momigliano_et_al_2017)
Downloaded 2 times
Description The file is in GenAlEx format, alleles coded as either "1" or "2". Individual and sampling location IDs are provided..
Download Genotypes_of_All_Loci_Excluding_8_outlier...7).csv (3.808 Mb)
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Title Genotypes_Loci_from_Fst_Core_Distribution_(Momigliano_et_al_2017)
Downloaded 1 time
Description Genotypes of all individuals for loci from the core distribution of Fst, i.e. excluding loci in the upper and lower 5% of the Fst distribution. This is the "neutral" dataset used in the manuscript for analyses of neutral genetic variation. The file is in GenAlEx format, alleles coded as either "1" or "2". Individual and sampling location IDs are provided.
Download Genotypes_Loci_from_Fst_Core_Distribution...7).csv (3.376 Mb)
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Title Genotypes_of_8_outlier_loci_(Momigliano_et_al_2017)
Downloaded 2 times
Description Genotypes for all individuals for the eight outlier loci identified as potential targets of local selection. The file is in GenAlEx format, alleles coded as either "1" or "2". Individual and sampling location IDs are provided.
Download Genotypes_of_8_outlier_loci_(Momigliano_e...7).csv (8.086 Kb)
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When using this data, please cite the original publication:

Momigliano P, Harcourt R, Robbins WD, Jaiteh V, Mahardika GN, Sembiring A, Stow A (2017) Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos). Heredity 119(3): 142-153. http://dx.doi.org/10.1038/hdy.2017.21

Additionally, please cite the Dryad data package:

Momigliano P, Harcourt R, Robbins WD, Jaiteh V, Mahardika GN, Sembiring A, Stow A (2017) Data from: Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.mt2m3
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