Data from: Population genomics analyses of European ibex species show lower diversity and higher inbreeding in reintroduced populations

Grossen C, Biebach I, Angelone-Alasaad S, Keller LF, Croll D

Date Published: April 24, 2017

DOI: http://dx.doi.org/10.5061/dryad.n276d

 

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Title raw SNP file
Description This is the raw SNP file used for all analyses. It was produced using GATK and pre-filtered using vcftools (i.e. minimal genotyping rate of 0.45 and a maximal normalized coverage of 2). This includes SNPs which are not within 90bp of cut sites (hence SNPs located on R2 reads are included here). For analyses presented in the manuscript, further filters were applied. See methods part in the manuscript.
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When using this data, please cite the original publication:

Grossen C, Biebach I, Angelone-Alasaad S, Keller LF, Croll D (2017) Population genomics analyses of European ibex species show lower diversity and higher inbreeding in reintroduced populations. Evolutionary Applications, online in advance of print. http://dx.doi.org/10.1111/eva.12490

Additionally, please cite the Dryad data package:

Grossen C, Biebach I, Angelone-Alasaad S, Keller LF, Croll D (2017) Data from: Population genomics analyses of European ibex species show lower diversity and higher inbreeding in reintroduced populations. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.n276d
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