Data from: ITS1: a DNA barcode better than ITS2 in eukaryotes?

Wang X

Date Published: September 4, 2014

DOI: http://dx.doi.org/10.5061/dryad.n56t9

 

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Title Code for DNA barcoding Gaps
Downloaded 42 times
Description A custom Python script ‘getSixValue.py’ for calculating intra- and interspecific Kimura 2-parameter (K2P) distances of the congeneric species of the ITS1 and ITS2 regions in different taxonomic groups
Download Code for DNA barcoding Gaps.zip (2.496 Kb)
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Title Codes for Species Identification Efficiencies
Downloaded 89 times
Description A custom Perl package called PESDET (version 0.1) for calculating species identification success rates, using the BLAST and BLAST+P distance (BLAST+PD) methods
Download README.txt (3.771 Kb)
Download Codes for Species Identification Efficiencies.zip (2.772 Mb)
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Title Dataset I
Downloaded 47 times
Description Dataset I used for the analyses of DNA barcoding gaps, species identification efficiency, sequence length and GC content
Download Dataset_I.xlsx (13.51 Mb)
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Title Dataset II
Downloaded 56 times
Description Dataset II used for the analysis of primer universality
Download Dataset_II.xlsx (5.977 Mb)
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When using this data, please cite the original publication:

Wang X, Liu C, Huang L, Bengtsson-Palme J, Chen H, Zhang J, Cai D, Li J (2014) ITS1: a DNA barcode better than ITS2 in eukaryotes? Molecular Ecology Resources, online in advance of print. http://dx.doi.org/10.1111/1755-0998.12325

Additionally, please cite the Dryad data package:

Wang X (2014) Data from: ITS1: a DNA barcode better than ITS2 in eukaryotes? Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.n56t9
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