Data from: Ecological opportunity alters the timing and shape of adaptive radiation

Burress ED, Tan M

Date Published: September 5, 2017

DOI: https://doi.org/10.5061/dryad.nh539

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Title MCC_Cichlidae_phylogeny_treePL_ML
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Description Maximum clade credibility tree of Cichlidae used for analyses in the Burress and Tan paper.
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Title Burress_and_Tan_Supplementary_Materials
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Description This file contains seven Supplementary Tables as well as Figure legends for four Supplementary Figures associated with the Burress and Tan paper.
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Title FIG_S1_delimitation_of_focal_clades
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Description Figure S1. Phylogeny of cichlid fishes used in the analyses for the Burress and Tan paper. The clades referred to in the text are delimited by colour (colonization-associated clades in red, non-colonization-associated clades in blue). Bootstrap values are listed at internal nodes.
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Title FIG_S2_BAMM_sensitivity_to_prior
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Description Figure S2. Prior and posterior distributions of the number of rate shifts based on priors of 1, 5, and 10 shifts. Although the distribution of the number of shifts in the posterior is sensitive to the prior, the most probable number of shifts supported by Bayes Factors (used throughout the Burress and Tan paper) is robust to the number of shifts specified in the prior.
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Title FIG_S3_BAMM_CSS_top9
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Description Figure S3. The top-9 rate shift configurations from the 95% credible shift set from BAMM analysis. The frequency (f) of each configuration is listed above each plot. Circles depict the locations of rate shifts. Larger circles depict more probable shifts. The branches are color-coded according to their relative diversification rates. Warm colors depict relatively fast rates whereas cold colors depict relatively slow rates.
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Title FIG_S4_RTT_clades
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Description Figure S4. Rate through time plots (mean ± 95% credible interval) for major clades discussed in the main text of the Burress and Tan paper. Color-codes correspond to those used in Figure 1 of the main text.
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When using this data, please cite the original publication:

Burress ED, Tan M (2017) Ecological opportunity alters the timing and shape of adaptive radiation. Evolution, online in advance of print. https://doi.org/10.1111/evo.13362

Additionally, please cite the Dryad data package:

Burress ED, Tan M (2017) Data from: Ecological opportunity alters the timing and shape of adaptive radiation. Dryad Digital Repository. https://doi.org/10.5061/dryad.nh539
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