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dc.contributor.author Riesch, Rüdiger
dc.contributor.author Muschick, Moritz
dc.contributor.author Lindtke, Dorothea
dc.contributor.author Villoutreix, Romain
dc.contributor.author Comeault, Aaron A.
dc.contributor.author Farkas, Timothy E.
dc.contributor.author Lucek, Kay
dc.contributor.author Hellen, Elizabeth
dc.contributor.author Soria-Carrasco, Víctor
dc.contributor.author Dennis, Stuart R.
dc.contributor.author de Carvalho, Clarissa F.
dc.contributor.author Safran, Rebecca J.
dc.contributor.author Sandoval, Cristina P.
dc.contributor.author Feder, Jeff
dc.contributor.author Gries, Regine
dc.contributor.author Crespi, Bernard J.
dc.contributor.author Gries, Gerhard
dc.contributor.author Gompert, Zach
dc.contributor.author Nosil, Patrik
dc.coverage.spatial California
dc.coverage.temporal Oligocene
dc.coverage.temporal Miocene
dc.coverage.temporal Pliocene
dc.coverage.temporal Pleistocene
dc.coverage.temporal Holocene
dc.date.accessioned 2017-02-17T20:40:36Z
dc.date.available 2017-02-17T20:40:36Z
dc.date.issued 2017-02-17
dc.identifier doi:10.5061/dryad.nq67q
dc.identifier.citation Riesch R, Muschick M, Lindtke D, Villoutreix R, Comeault AA, Farkas TE, Lucek K, Hellen E, Soria-Carrasco V, Dennis SR, de Carvalho CF, Safran RJ, Sandoval CP, Feder J, Gries R, Crespi BJ, Gries G, Gompert Z, Nosil P (2017) Transitions between phases of genomic differentiation during stick-insect speciation. Nature Ecology & Evolution 1: 0082.
dc.identifier.issn 2397-334X
dc.identifier.uri http://hdl.handle.net/10255/dryad.132820
dc.description Speciation can involve a transition from a few genetic loci that are resistant to gene flow to genome-wide differentiation. However, only limited data exist concerning this transition and the factors promoting it. Here, we study phases of speciation using data from >100 populations of 11 species of Timema stick insects. Consistent with early phases of genic speciation, adaptive colour-pattern loci reside in localized genetic regions of accentuated differentiation between populations experiencing gene flow. Transitions to genome-wide differentiation are also observed with gene flow, in association with differentiation in polygenic chemical traits affecting mate choice. Thus, intermediate phases of speciation are associated with genome-wide differentiation and mate choice, but not growth of a few genomic islands. We also find a gap in genomic differentiation between sympatric taxa that still exchange genes and those that do not, highlighting the association between differentiation and complete reproductive isolation. Our results suggest that substantial progress towards speciation may involve the alignment of multi-faceted aspects of differentiation.
dc.relation.ispartofseries 1;0082;2017
dc.relation.haspart doi:10.5061/dryad.nq67q/1
dc.relation.haspart doi:10.5061/dryad.nq67q/2
dc.relation.haspart doi:10.5061/dryad.nq67q/3
dc.relation.haspart doi:10.5061/dryad.nq67q/4
dc.relation.haspart doi:10.5061/dryad.nq67q/5
dc.relation.haspart doi:10.5061/dryad.nq67q/6
dc.relation.haspart doi:10.5061/dryad.nq67q/11
dc.relation.haspart doi:10.5061/dryad.nq67q/12
dc.relation.haspart doi:10.5061/dryad.nq67q/13
dc.relation.haspart doi:10.5061/dryad.nq67q/14
dc.relation.haspart doi:10.5061/dryad.nq67q/15
dc.relation.haspart doi:10.5061/dryad.nq67q/16
dc.relation.haspart doi:10.5061/dryad.nq67q/17
dc.relation.haspart doi:10.5061/dryad.nq67q/18
dc.relation.haspart doi:10.5061/dryad.nq67q/19
dc.relation.haspart doi:10.5061/dryad.nq67q/7
dc.relation.haspart doi:10.5061/dryad.nq67q/8
dc.relation.haspart doi:10.5061/dryad.nq67q/9
dc.relation.haspart doi:10.5061/dryad.nq67q/10
dc.relation.isreferencedby doi:10.1038/s41559-017-0082
dc.subject evolution
dc.subject genomics
dc.subject adaptation
dc.subject speciation
dc.subject mate choice
dc.title Data from: Transitions between phases of genomic differentiation during stick-insect speciation
dc.type Article
dwc.ScientificName Timema bartmani
dwc.ScientificName Timema boharti
dwc.ScientificName Timema californicum
dwc.ScientificName Timema cristinae
dwc.ScientificName Timema chumash
dwc.ScientificName Timema knulli
dwc.ScientificName Timema landelsensis
dwc.ScientificName Timema petita
dwc.ScientificName Timema podura
dwc.ScientificName Timema poppensis
dwc.ScientificName Timema sp nov. "cuesta ridge"
dc.contributor.correspondingAuthor Patrik Nosil
prism.publicationName Nature Ecology & Evolution

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Title Whole-genome analyses of published T. cristinae genomes
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Title Tests for effects of colour-pattern and CHCs on sexual isolation and genome wide FST
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Title Genomic differentiation between sympatric Timema populations and species (part 00 of 09)
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Title Genomic differentiation between sympatric Timema populations and species (part 01 of 09)
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Title Genomic differentiation between sympatric Timema populations and species (part 02 of 09)
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Title Genomic differentiation between sympatric Timema populations and species (part 06 of 09)
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Title Genotyping-by-sequencing (GBS) and stages of speciation
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Title Phylogenetic inference and molecular dating
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Title Evolution of reproductive isolation and phenotypic differentiation through time
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Title Programs and scripts for processing and analysing data
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