Data from: Genomic Signature of an Avian Lilliput Effect across the K-Pg Extinction

Berv JS, Field DJ

Date Published: July 7, 2017

DOI: http://dx.doi.org/10.5061/dryad.nr654

 

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Title Supplementary Table 1
Downloaded 11 times
Description Life history data table formatted for input into the Coevol analytical software. Life history data were obtained from the AnAge senescence database Build 13 (De Magalhães, J.P. and Costa, J. 2009, Tacutu, R., Craig, T., et al. 2013). We collated the following data: (1) age at sexual maturity (days), (2) incubation time (days), (3) number of eggs laid per year, (4) mass at hatching (grams), (5) growth rate (1/days), (6), maximum recorded longevity (years), and (7) total metabolic rate (watts). Relative to the set of 198 avian taxa in (Prum, R.O., Berv, J.S., et al. 2015), when matching genera occurred in the AnAge database, we used averages at the genus level; otherwise, we used family-level averages. Body mass (grams, species average) data were collected from Dunning Jr, J.B. (1992). This yielded a data matrix with ~49% missing data overall (with no missing data for body mass).
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Title Supplementary Table 2
Downloaded 10 times
Description Correlation coefficients and posterior probabilities from substitution rate analysis with Coevol 1.4b (partial coefficients summarized in Figure 2 colors). Raw posterior probabilities are reported as ranging from from 0.0 (100% support for a negative correlation) to 1.0 (100% support for a positive correlation). Negative correlations are reported as 1-raw in the main text.
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Title Supplementary Table 3
Downloaded 15 times
Description Data table of estimated crown fossil masses used as body size priors to calibrate ASRs. Mean body mass estimates and associated 95% prediction intervals are derived from published predictive equations (Field, D.J., Lynner, C., et al. 2013). Unless otherwise noted, measurements for these taxa are taken from holotype specimens, and unless otherwise noted, published measurements were used from references noted in the table.
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Title Data File S4
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Description We provide as a zip archive the data and script files necessary to reproduce the major analyses in the present work. A detailed readme txt file is included in this zip archive which outlines the analytical procedures needed to replicate the major analyses in the present work.
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Title Supplementary Appendix
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Description Supplementary discussion and analyses, Figures S1-S8, and associated captions.
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When using this data, please cite the original publication:

Berv JS, Field DJ (2017) Genomic Signature of an Avian Lilliput Effect across the K-Pg Extinction. Systematic Biology, online in advance of print. http://dx.doi.org/10.1093/sysbio/syx064

Additionally, please cite the Dryad data package:

Berv JS, Field DJ (2017) Data from: Genomic Signature of an Avian Lilliput Effect across the K-Pg Extinction. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.nr654
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