Data from: Population genomics of local adaptation versus speciation in coral reef fishes (Hypoplectrus spp, Serranidae)

Picq S, McMillan O, Puebla O

Date Published: May 17, 2016

DOI: http://dx.doi.org/10.5061/dryad.nt722

 

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Title SNP calls for RAD data grouped by location, vcf format
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Description SNP calls for filtered and assembled RAD data grouped by location (Belize, Honduras, Panama), vcf format.
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Title SNP calls for RAD data grouped by samples, vcf format
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Description SNP calls for filtered and assembled RAD data grouped by samples (species/location, 9 samples), vcf format.
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Title Consensus sequences of the three repeated outliers
Downloaded 3 times
Description Consensus sequences of the three mini-contigs assembled around the repeated outlier SNPs.
Download Mini_contigs.txt (1.172 Kb)
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Title Filetered and assembled RAD data
Downloaded 6 times
Description Filtered and assembled RAD data for the assembly with m=3 and M=2
Download RAD_data.zip (17.15 Gb)
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When using this data, please cite the original publication:

Picq S, McMillan WO, Puebla O (2016) Population genomics of local adaptation versus speciation in coral reef fishes (Hypoplectrusspp, Serranidae). Ecology and Evolution 6(7): 2109-2124. http://dx.doi.org/10.1002/ece3.2028

Additionally, please cite the Dryad data package:

Picq S, McMillan O, Puebla O (2016) Data from: Population genomics of local adaptation versus speciation in coral reef fishes (Hypoplectrus spp, Serranidae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.nt722
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