Data from: Genomic atolls of differentiation in coral reef fishes (Hypoplectrus spp, Serranidae)

Puebla O, Bermingham E, McMillan WO

Date Published: September 17, 2014

DOI: http://dx.doi.org/10.5061/dryad.nv1f0

 

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Title contig_sequences
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Description Sequences of the mini-contigs assembled around SNPs of interest. Blast hits indicated between parentheses.
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Title genepop_input_file
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Title sequence_data
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Title snp_calls
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Title Stacks catalog
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Description Stacks catalog for the main assembly (m=3 M=2)
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Title Structure input file (60th-70th percentiles)
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Description Structure input file (60th-70th percentiles)
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Title Structure input file (70th-80th percentiles)
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Description Structure input file (70th-80th percentiles)
Download structure_input_file_70.txt (6.239 Mb)
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Title Structure input file (80th-90th percentiles)
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Description Structure input file (80th-90th percentiles)
Download structure_input_file_80.txt (6.354 Mb)
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Title Structure input file (above 90th percentiles)
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Description Structure input file (above 90th percentiles)
Download structure_input_file_90.txt (5.978 Mb)
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Title Structure input file (all data)
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Description Structure input file (all data)
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Title Tree file (above 90th percentile)
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Description Tree file (above 90th percentile)
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Title Tree file (all data)
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Description Tree file (all data)
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Title Microsatellite data (Genepop format, 3-digit)
Downloaded 27 times
Description Microsatellite data (Genepop format, 3-digit)
Download usats_raw_data.txt (38.09 Kb)
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When using this data, please cite the original publication:

Puebla O, Bermingham E, McMillan WO (2014) Genomic atolls of differentiation in coral reef fishes (Hypoplectrus spp, Serranidae). Molecular Ecology 23(21): 5291-5303. http://dx.doi.org/10.1111/mec.12926

Additionally, please cite the Dryad data package:

Puebla O, Bermingham E, McMillan WO (2014) Data from: Genomic atolls of differentiation in coral reef fishes (Hypoplectrus spp, Serranidae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.nv1f0
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