Data from: The impact of library preparation protocols on the accuracy of allele frequency estimates in Pool-Seq data

Kofler R, Nolte V, Schlötterer C

Date Published: May 27, 2015

DOI: http://dx.doi.org/10.5061/dryad.p31j8

 

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Title Python scripts used for the analysis
Downloaded 11 times
Description for details about the script see the attached readme
Download scripts-mre-koflernolteschlotc.zip (10.41 Kb)
Download README.txt (833 bytes)
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Title set of high quality SNPs used in the analysis
Downloaded 6 times
Description SNPs were identified by pooling the allele counts acrosss all libraries and requiring a minium base quality of 40 and a minimum allele count of 3; contains SNPs for D.melanogaster and D.simulans separately
Download snps-kofnolschlot.zip (50.07 Mb)
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Title allele counts for all sites, all libraries and all experiments (PoPoolation2 data)
Downloaded 7 times
Description for detail see the attached readme file
Download allelelcounts.zip (1.243 Gb)
Download README.txt (1.144 Kb)
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When using this data, please cite the original publication:

Kofler R, Nolte V, Schlötterer C (2015) The impact of library preparation protocols on the accuracy of allele frequency estimates in Pool-Seq data. Molecular Ecology Resources 16(1):118-122. http://dx.doi.org/10.1111/1755-0998.12432

Additionally, please cite the Dryad data package:

Kofler R, Nolte V, Schlötterer C (2015) Data from: The impact of library preparation protocols on the accuracy of allele frequency estimates in Pool-Seq data. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.p31j8
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