Data from: Recombination-dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure

Ruhlman TA, Zhang J, Blazier JC, Sabir JSM, Jansen RK

Date Published: April 12, 2017

DOI: http://dx.doi.org/10.5061/dryad.p34h3

 

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Title rpl20 repeat alignment
Downloaded 7 times
Description MAFFT alignment used to generate phylogram. Alignment was trimmed to exclude overhanging sequences and used to infer putative gene conversion sites.
Download R20 alignment.nex (11.82 Kb)
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Title 3904 PacBio raw reads of Monsonia emarginata
Downloaded 6 times
Description Corrected PacBio reads greater than 1 kb
Download mon_pacbio_3904 (12.49 Mb)
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When using this data, please cite the original publication:

Ruhlman TA, Zhang J, Blazier JC, Sabir JSM, Jansen RK (2017) Recombination-dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure. American Journal of Botany 104(4): 559-572. http://dx.doi.org/10.3732/ajb.1600453

Additionally, please cite the Dryad data package:

Ruhlman TA, Zhang J, Blazier JC, Sabir JSM, Jansen RK (2017) Data from: Recombination-dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.p34h3
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