Data from: A non-lethal sampling method to obtain, generate and assemble whole-blood transcriptomes from small, wild mammals

Huang Z, Gallot A, Lao NT, Puechmaille SJ, Foley NM, Jebb D, Bekaert M, Teeling EC

Date Published: July 16, 2015

DOI: http://dx.doi.org/10.5061/dryad.p760b

 

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Title A_assembly_RABT
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Description The reference annotation based transcript (RABT) assembly of individual A transcriptome
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Title B_assembly_RABT
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Description The reference annotation based transcript (RABT) assembly of individual B transcriptome
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Title C_assembly_RABT
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Description The reference annotation based transcript (RABT) assembly of individual C transcriptome
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Title D_assembly_RABT
Downloaded 3 times
Description The reference annotation based transcript (RABT) assembly of individual D transcriptome
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Title Super_assembly_RABT
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Description The reference annotation based transcript (RABT) assembly of pooled libraries (Super transcriptome)
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Title Perl Script
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Description This Perl script enables you to extract the longest open reading frame (ORF) from nucleatide sequences
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Title GO_Annotation
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Description The Gene Ontology annotation of the 'Super' transcriptome assembly based on the RABT method
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Title Mitochondrial_Site_Coverage
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Description The mitochondrial site coverage by the 'Super' transcriptome data
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Title Transcriptome_comparisons_among_individuals
Downloaded 13 times
Description The unique annotated accessions from each individual for comparison
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Title Transcriptome_comparisons_among_tissues
Downloaded 16 times
Description The unique annotated accessions from each tissue type for comparison
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Title FPKM_Super_Transcriptome
Downloaded 15 times
Description The FPKM value for each gene locus from the 'Super' transcriptome based on the RABT method
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When using this data, please cite the original publication:

Huang Z, Gallot A, Lao NT, Puechmaille SJ, Foley NM, Jebb D, Bekaert M, Teeling EC (2015) A non-lethal sampling method to obtain, generate and assemble whole-blood transcriptomes from small, wild mammals. Molecular Ecology Resources 16(1): 150-162. http://dx.doi.org/10.1111/1755-0998.12447

Additionally, please cite the Dryad data package:

Huang Z, Gallot A, Lao NT, Puechmaille SJ, Foley NM, Jebb D, Bekaert M, Teeling EC (2015) Data from: A non-lethal sampling method to obtain, generate and assemble whole-blood transcriptomes from small, wild mammals. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.p760b
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