Data from: Susceptibility to type 2 diabetes may be modulated by haplotypes in G6PC2, a target of positive selection

Al-Daghri NM, Pontremoli C, Cagliani R, Forni D, Alokail MS, Al-Attas OS, Sabico S, Riva S, Clerici M, Sironi M

Date Published: January 27, 2017

DOI: http://dx.doi.org/10.5061/dryad.pk50t

 

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Title Mammalian G6PC2 alignment
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Title G6PC2_chimpanzee_gammaMap
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Title G6PC2_gorilla_gammaMap
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Title G6PC2_human_gammaMap
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Title G6PC2_outgroup
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Title Mammalian G6PC3 alignment
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Title G6PC3_chimpanzee_gammaMap
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Title G6PC3_gorilla_gammaMap
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Title G6PC3_human_gammaMap
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Title G6PC3_outgroup
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Title Mammalian G6PC alignment
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Title G6PC_chimpanzee_gammaMap
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Title G6PC_gorilla_gammaMap
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Title G6PC_human_gammaMap
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Title G6PC_outgroup
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Title Metazoans align
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Title G6PC, G6PC2 and G6PC3 phylogenetic trees
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Title plink_ped_file
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Title plink_map_file
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Title plink_covariates_file
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Title SKAT_covariates_file
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Title SKAT_phenotype_file
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Title SKAT_all_genotype_file
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Description Variant genotypes are ordered as follows: rs560887, rs492594, rs2232328, rs2232323, rs146779637, rs2232326, rs540914059, rs16856162, rs2232321, rs181737385 , rs77719485, rs10166439, rs189856873
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When using this data, please cite the original publication:

Al-Daghri NM, Pontremoli C, Cagliani R, Forni D, Alokail MS, Al-Attas OS, Sabico S, Riva S, Clerici M, Sironi M (2017) Susceptibility to type 2 diabetes may be modulated by haplotypes in G6PC2, a target of positive selection. BMC Evolutionary Biology 17: 43. http://dx.doi.org/10.1186/s12862-017-0897-z

Additionally, please cite the Dryad data package:

Al-Daghri NM, Pontremoli C, Cagliani R, Forni D, Alokail MS, Al-Attas OS, Sabico S, Riva S, Clerici M, Sironi M (2017) Data from: Susceptibility to type 2 diabetes may be modulated by haplotypes in G6PC2, a target of positive selection. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.pk50t
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