Data from: Adaptive divergence between lake and stream populations of an East African cichlid fish

Theis A, Ronco F, Indermaur A, Salzburger W, Egger B

Date Published: September 24, 2014

DOI: http://dx.doi.org/10.5061/dryad.pp0q1

 

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Title Microsatellite genotypes of wild populations
Downloaded 21 times
Description Microsatellite genotypes used for population genetic analyses
Download A.burtoni_msats_Input.csv (62.16 Kb)
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Title MtDNA sequence alignment
Downloaded 3 times
Description mtDNA sequence alignment used to construct haplotype network
Download Abur_D-loop_alignment.csv (153.8 Kb)
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Title Body shape data of wild populations
Downloaded 18 times
Description tps input file with landmark coordinates for body shape analyses of 20 populations
Download BS_morphometrics_wild_populations.tps (37.81 Kb)
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Title Body shape data of individuals from the pond experiment
Downloaded 5 times
Description tps input file with landmark coordinates for body shape analyses of 20 populations
Download BS_morphometrics_pond_experiment.tps (288.3 Kb)
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Title Gill raker data of wild populations
Downloaded 8 times
Description Metric measurements on specimens used to compare gill raker morphology in wild populations
Download gill_raker_wild_populations.csv (18.41 Kb)
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Title Gill raker data of F1 individuals
Downloaded 3 times
Description Metric measurements on F1individuals used to compare gill raker morphology
Download gill_raker_juveniles_pond_experiment.csv (8.353 Kb)
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Title Lower pharyngeal jaw morphology data of wild populations
Downloaded 7 times
Description tps input file with landmark coordinates used for geometric morphometric on lower pharyngeal jaws
Download LPJ_morphometrics.tps (312.1 Kb)
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Title Data on stomach contents
Downloaded 10 times
Description Stomach content components of wild populations
Download stomach.csv (8.181 Kb)
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Title Input file for partial mantel tests and MRM
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Description Input file with pair-wise distances (lake-stream populations) to test for associations between genetic differentiation, morphometric traits and environment
Download input file partial mantel test and MRM.csv (4.125 Kb)
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Title Input file for simple mantel tests
Downloaded 2 times
Description Input file with pair-wise distances (shoreline populations) to test for isolation-by-distance
Download input file simple mantel test.csv (4.809 Kb)
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Title Summary file for CERVUS analyses
Downloaded 3 times
Description Parentage assignment of the pond mating experiment
Download summaryFile_pond_experiment.csv (39.63 Kb)
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Title Microsatellite genotypes of F1 and parental fish (pond 1)
Downloaded 2 times
Description Microsatellite genotypes used for parentage assignment in pond 1
Download genotypeFILE_Pond_1.csv (8.454 Kb)
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Title Microsatellite genotypes of F1 and parental fish (pond 2)
Downloaded 4 times
Description Microsatellite genotypes used for parentage assignment in pond 2
Download genotypeFILE_Pond_2.csv (9.182 Kb)
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Title Microsatellite genotypes of F1 and parental fish (pond 3)
Downloaded 4 times
Description Microsatellite genotypes used for parentage assignment in pond 3
Download genotypeFILE_Pond_3.csv (5.963 Kb)
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Title Microsatellite genotypes of F1 and parental fish (pond 4)
Downloaded 4 times
Description Microsatellite genotypes used for parentage assignment in pond 4
Download genotypeFILE_Pond_4.csv (8.144 Kb)
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Title Microsatellite genotypes of F1 and parental fish (pond 5)
Downloaded 5 times
Description Microsatellite genotypes used for parentage assignment in pond 5
Download genotypeFILE_Pond_5.csv (5.635 Kb)
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When using this data, please cite the original publication:

Theis A, Ronco F, Indermaur A, Salzburger W, Egger B (2014) Adaptive divergence between lake and stream populations of an East African cichlid fish. Molecular Ecology 23(21): 5304-5322. http://dx.doi.org/10.1111/mec.12939

Additionally, please cite the Dryad data package:

Theis A, Ronco F, Indermaur A, Salzburger W, Egger B (2014) Data from: Adaptive divergence between lake and stream populations of an East African cichlid fish. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.pp0q1
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