Data from: RAD sequencing and genomic simulations resolve hybrid origins within North American Canis

Rutledge LY, Devillard S, Boone JQ, Hohenlohe PA, White BN

Date Published: September 7, 2017

DOI: https://doi.org/10.5061/dryad.pr318

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title MetaData_Quality_VCF
Downloaded 8 times
Description This file contains 1) metadata that describes each sample used, 2) quality scores from sequencing on Illumina platform, and 3) an initial VCF file with individual genotypes compiled from the raw sequencing data (refer to methods in publication for a description of genotypes used to generate the PCA in the manuscript).
Download MetaData_Quality_VCF.zip (11.73 Mb)
Details View File Details
Title Eastern Wolf Raw Data
Downloaded 10 times
Description This file contains raw Illumina sequence data for the Eastern Wolves (Canis lycaon). Please check the metadata to confirm and cross-reference sample IDs.
Download EasternWolfRawData.zip (8.729 Gb)
Details View File Details
Title Eastern Coyote Raw Data
Downloaded 7 times
Description This file contains raw Illumina sequence data for the Eastern Coyotes (Canis latrans var.). Please check the metadata to confirm and cross-reference sample IDs.
Download EasternCoyoteRawData.zip (5.550 Gb)
Details View File Details
Title Great Lakes Boreal Wolf Raw Data
Downloaded 6 times
Description This file contains raw Illumina sequence data for the Great Lakes Boeal Wolves (Canis lupus var). Please check the metadata to confirm and cross-reference sample IDs.
Download GreatLakesBorealWolfRawData.zip (5.018 Gb)
Details View File Details
Title Grey Wolf Raw Data
Downloaded 9 times
Description This file contains raw Illumina sequence data for the Grey Wolves (Canis lupus) and Dog (Canis lupus familiaris). Please check the metadata to confirm and cross-reference sample IDs.
Download GreyWolfDogRawData.zip (6.343 Gb)
Details View File Details
Title Western Coyote Raw Data
Downloaded 49 times
Description This file contains raw Illumina sequence data for the Western Coyotes (Canis latrans). Please check the metadata to confirm and cross-reference sample IDs.
Download WesternCoyoteRawData.zip (7.115 Gb)
Details View File Details

When using this data, please cite the original publication:

Rutledge LY, Devillard S, Boone JQ, Hohenlohe PA, White BN (2015) RAD sequencing and genomic simulations resolve hybrid origins within North American Canis. Biology Letters 11(7): 20150303. https://doi.org/10.1098/rsbl.2015.0303

Additionally, please cite the Dryad data package:

Rutledge LY, Devillard S, Boone JQ, Hohenlohe PA, White BN (2015) Data from: RAD sequencing and genomic simulations resolve hybrid origins within North American Canis. Dryad Digital Repository. https://doi.org/10.5061/dryad.pr318
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: