Data from: Protein degradation rate in Arabidopsis thaliana leaf growth and development

Li L, Nelson CJ, Troesch J, Castleden I, Huang S, Millar AH

Date Published: January 31, 2017

DOI: http://dx.doi.org/10.5061/dryad.q3h85

 

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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_1
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Description Supplemental Data 1 Growth rates of Arabidopsis leaf 3, leaf 5 and leaf 7.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_2
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Description Supplemental Data 2. Protein degradation rates of 1228 proteins and statistical analysis across samples.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_3
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Description Supplemental Data 3. Ratios of specific protein abundances relative to a 15N fully labelled reference.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_4
Downloaded 41 times
Description Supplemental Data 4. The correlation of intrinsic properties of proteins with their protein degradation rates
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_5
Downloaded 29 times
Description Supplemental Data 5. Comparison of protein degradation rate (KD) and protein abundance between selected proteins in leaf 3 and leaf 7.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_6
Downloaded 22 times
Description Supplemental Data 6. Comparison of protein degradation rate (KD) and leaf growth rates in leaf 3, leaf 5 and leaf 7
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_7
Downloaded 22 times
Description Supplemental Data 7. Calculation of ATP costs for protein synthesis and degradation in leaf 3, leaf 5 and leaf 7.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_8
Downloaded 22 times
Description Supplemental Data 8. Comparison of protein degradation rate and protein abundance for selected proteins of interest.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_9
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Description Supplemental Data 9. Determination of protein abundance fold change relative to a 15N reference in 36 individual leaf samples.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_10
Downloaded 35 times
Description Supplemental Data 10. The peptide identification data for each time point for peptides at T=0 days in the spiked in 15N reference experiment
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_11
Downloaded 30 times
Description Supplemental Data 11. The peptide identification data for each time point for peptides at T=1 day in the spiked in 15N reference experiment.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_12
Downloaded 28 times
Description Supplemental Data 12. The peptide identification data for each time point for peptides at T=3 days in the spiked in 15N reference experiment
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_13
Downloaded 23 times
Description Supplemental Data 13. The peptide identification data for each time point for peptides at T=5 days in the spiked in 15N reference experiment
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_14
Downloaded 19 times
Description Supplemental Data 14. Determination of labelled protein fraction (LPF) for peptides by 15N progressively labelling in 27 individual leaf samples.
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Title TPC2016-00768-LSBR1_Supplemental_Data_Set_15
Downloaded 29 times
Description Supplemental Data 15. The peptide identification data for 15N progressively labelled peptides at all time points.
Download TPC2016-00768-LSBR1_Supplemental_Data_Set_15.xlsx (22.56 Mb)
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When using this data, please cite the original publication:

Li L, Nelson CJ, Troesch J, Castleden I, Huang S, Millar AH (2017) Protein degradation rate in Arabidopsis thaliana leaf growth and development. The Plant Cell 29(2): 207-228. http://dx.doi.org/10.1105/tpc.16.00768

Additionally, please cite the Dryad data package:

Li L, Nelson CJ, Troesch J, Castleden I, Huang S, Millar AH (2017) Data from: Protein degradation rate in Arabidopsis thaliana leaf growth and development. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.q3h85
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