Data from: Contrasting historical and recent gene flow among African buffalo herds in the Caprivi Strip of Namibia

 

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Title Microsatellite data for 134 African buffalo, Genepop Format
Description 134 African buffalo genetic samples collected 2006-2009 in the Caprivi Strip, Namibia, genotyped at 10 microsatellite loci, presented in Genepop format for the 6 herds (populations) in the study
Download Buff134_10loc6pop (12.36 Kb)
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Title UnityResistanceSamplingPolygons
Description These are circuitscape cumulative resistance estimates using the sampling polygons for the 5 native populations (excluding Mudumu, the translocated population)
Download UnityResistanceSamplingPolygons.txt (232 bytes)
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Title UnityResistanceHomeRangePolygons
Description These are circuitscape cumulative resistance estimates for 5 buffalo populations (excluding Mudumu, the translocated population) but using home range rather than sampling polygons
Download UnityResistanceHomeRangePolygons.txt (204 bytes)
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Title Buff118_10classes_SPAGEDI
Description SpaGeDi file, 10 microsatellite loci, all buffalo except for those in the translocated population of Mudumu, set for 10 distance classes. To change number of distance classes, change "-10" in row two to another value (e.g., "-20" for 20 distance classes)
Download Buff118_10classes_SPAGEDI.txt (12.79 Kb)
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Title BuffaloSampleLocations
Description GIS data: Point locations for genetic samples
Download BuffaloSampleLocations.zip (6.881 Kb)
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Title AnalysisClip
Description GIS layer: polygon to clip analyses to extent used in paper
Download AnalysisClip.zip (1.102 Kb)
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Title AllMainRivers
Description GIS data: all large rivers in and around Caprivi Strip; these data were used when generating resistance layers describing distance from rivers
Download AllMainRivers.zip (3.635 Mb)
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Title VetFence
Description Location of the veterinary fence on the southern edge of the Caprivi Strip that limits buffalo movements.
Download VetFence.zip (2.407 Kb)
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When using this data, please cite the original publication:

Epps CW, Castillo JA, Schmidt-Kuentzel A, du Preez P, Stuart-Hill G, Jago M, Naidoo R (2013) Contrasting historical and recent gene flow among African buffalo herds in the Caprivi Strip of Namibia. Journal of Heredity 104(2): 172-181. http://dx.doi.org/10.1093/jhered/ess142

Additionally, please cite the Dryad data package:

Epps CW, Castillo JA, Schmidt-Kuentzel A, du Preez P, Stuart-Hill G, Jago M, Naidoo R (2013) Data from: Contrasting historical and recent gene flow among African buffalo herds in the Caprivi Strip of Namibia. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.q50qs
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