Data from: DNA barcoding of tuberous Orchidoideae: a resource for identification of orchids used in Salep

Ghorbani A, Gravendeel B, Selliah S, Zarré S, de Boer H

Date Published: November 2, 2016

DOI: http://dx.doi.org/10.5061/dryad.qb36g

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Supplements 1-12
Downloaded 9 times
Description Supplemental Data Supplement 1. Reference sequences derived from vouchers collected for this study. Supplement 2. Reference sequences derived from external NCBI GenBank accessions. Supplement 3. GenBank accession numbers of the Salep tubers. Supplement 4. RAxML maximum likelihood phylogenetic tree for nrITS. Supplement 5. RAxML maximum likelihood phylogenetic tree for trnL-F spacer. Supplement 6. RAxML maximum likelihood phylogenetic tree for matK. Supplement 7. RAxML maximum likelihood phylogenetic tree for the concatenated matrix. Supplement 8. MrBayes bayesian phylogenetic tree for nrITS. Supplement 9. MrBayes bayesian phylogenetic tree for trnL-F spacer. Supplement 10. MrBayes bayesian phylogenetic tree for matK. Supplement 11. MrBayes bayesian phylogenetic tree for the concatenated matrix. Supplement 12. Molecular identifications of tubers based on similarity- and tree-based approaches.
Download Supplements 1-12.zip (316.3 Kb)
Details View File Details
Title Sequence alignment files
Downloaded 6 times
Description Alignment matrices in FASTA format per individual marker and concatenated matrix for RAxML and MrBayes phylogenetic analyses. Matrices are labelled with the corresponding tree supplement name and number.
Download Sequence alignment files.zip (92.32 Kb)
Details View File Details

When using this data, please cite the original publication:

Ghorbani A, Gravendeel B, Selliah S, Zarré S, de Boer H (2017) DNA barcoding of tuberous Orchidoideae: a resource for identification of orchids used in Salep. Molecular Ecology Resources 17(2): 342–352. http://dx.doi.org/10.1111/1755-0998.12615

Additionally, please cite the Dryad data package:

Ghorbani A, Gravendeel B, Selliah S, Zarré S, de Boer H (2016) Data from: DNA barcoding of tuberous Orchidoideae: a resource for identification of orchids used in Salep. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.qb36g
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: