Data from: Reconciling hierarchical taxonomy with molecular phylogenies

Holt BG, Jønsson KA

Date Published: August 19, 2014

DOI: http://dx.doi.org/10.5061/dryad.qd3pd

 

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Title SM1 - Temporal banding taxonomic classifications for birds and mammals
Downloaded 98 times
Description Taxonomic hierarchies for birds and mammals, produced by temporal banding of dated phylogenies with corresponding traditional taxonomies.
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Title SM2 - Taxonomic error for bird and mammal clades
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Description Taxonomic error scores for traditional bird and mammal taxonomic order, families and genera.
Download SM2 - Taxonomic error for bird and mammal...es.xls (375.2 Kb)
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Title SM3 - Results for alternative bird analysis
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Description Summary results for alternative versions of bird temporal banding classification analysis.
Download SM3 - Results for alternative bird analysis.pdf (329.6 Kb)
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Title SM4 R code and example data
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Description Example code and data for applying temporal banding to a phylogeny and calculating standardised error scores. See manuscript for references to original data sources.
Download SM4 R code and example data.zip (4.034 Kb)
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When using this data, please cite the original publication:

Holt BG, Jønsson KA (2014) Reconciling hierarchical taxonomy with molecular phylogenies. Systematic Biology 63(6): 1010-1017. http://dx.doi.org/10.1093/sysbio/syu061

Additionally, please cite the Dryad data package:

Holt BG, Jønsson KA (2014) Data from: Reconciling hierarchical taxonomy with molecular phylogenies. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.qd3pd
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