Data from: Fossils, molecules, divergence times, and the origin of Lissamphibians

 

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Title Marjanovic_&_Laurin_App_1
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Description Methods and sources used to compile the main phylogeny (Figs. 3–7) and to determine the stratigraphic distribution of various lissamphibian species, and of the fossiliferous localities.
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Title Marjanovic_&_Laurin_App_2
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Description Timetree in pdf format.
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Title Marjanovic_&_Laurin_App_3
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Description Comparison between the estimated minimal age of various taxa under our supertree and under the phylogeny of Frost et al. (2006).
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Title Marjanovic_&_Laurin_App_4
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Description Estimated date of appearance of selected taxa in the supertree under various assumptions of branch lengths.
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Title Marjanovic_&_Laurin_App_5
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Description Estimated date of appearance of selected taxa under various random resolutions of the polytomies in the supertree.
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Title Marjanovic_&_Laurin_App_6
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Description Biological nomenclature.
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Title Marjanovic_&_Laurin_App_7
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Description List of localities that have yielded lissamphibian fossils.
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Title Marjanovic_&_Laurin_App_8
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Title Marjanovic_&_Laurin_App_9
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Description Correlation and discrepancy between the predicted number of fossiliferous lissamphibian localities according to various models and the observed number of localities.
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Title Marjanovic_&_Laurin_App_10
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Description Lissamphibian biodiversity through time.
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Title Marjanovic_&_Laurin_App_11
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Description Model parameters chosen by Modeltest 3.7 using a neighbor joining (NJ) and the most parsimonious (MP) guide trees, compared to the model used by Zhang et al. (2005; pers. comm.) which was selected by Modeltest 3.06.
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Title Marjanovic_&_Laurin_App_12
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Description Quartets used for quartet-dating in QDate 1.11 (see Table 5).
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Title Marjanovic_&_Laurin_App_13
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Description Molecular divergence dates (rounded to Ma ago) calculated by quartet dating using QDate 1.11 using the evolution models from the three right columns of Appendix 11, compared to those reported (with confidence intervals) by Zhang et al. (2005) and to those from our supertree (Figs. 3–7).
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Title Marjanovic_&_Laurin_App_14
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Description Divergence dates calculated by penalized maximum likelihood using r8s 1.71 (TN algorithm) under different assumptions.
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Title Marjanovic_&_Laurin_App_15
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Description Molecular divergence dates calculated using PATHd8 1.0, rounded to the nearest Ma.
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When using this data, please cite the original publication:

Marjanović, D, Laurin M (2007) Fossils, molecules, divergence times, and the origin of Lissamphibians. Systematic Biology 56(3): 369-388. http://dx.doi.org/10.1080/10635150701397635

Additionally, please cite the Dryad data package:

Marjanović D, Laurin M (2007) Data from: Fossils, molecules, divergence times, and the origin of Lissamphibians. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.qt48h
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