Data from: Population genetic data of a model symbiotic cnidarian system reveal remarkable symbiotic specificity and vectored introductions across ocean basins

 

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Title MicroSatResults
Downloaded 67 times
Description Symbiodinium genotypes associated with Aiptasia. Genotypes were determined using 18S RFLP, ITS2 DGGE, and 6 microsatellite markers specific to Symbiodinium Clade B. The spreadsheets provide sample location, sample ID, RFLP and DGGE proflies, as well as the allele sizes for each microsatellite. The data are presented on two worksheets within the file. The first worksheet includes samples in which Clade B was detected according to the 18S RFLP. The second worksheet includes samples from Florida in which only Clade A was detected according to the 18S RFLP, but the samples were screened with the Clade B-specific microsatellites to determine whether low levels of Clade B (i.e., "background" or "cryptic" populations) could be detected.
Download MicroSatResults.xls (67.58 Kb)
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Title Aiptasia_Sym_B_MicSat_Fla2
Downloaded 20 times
Description Nucleotide alignment of DNA sequences from microsatellite flanking region loci CA4.86 and Si15. The alignment includes Symbiodinium minutum associated with Aiptasia from field collected and cultured specimens as well as Symbiodinium samples collected from other hosts.
Download Aiptasia_Sym_B_MicSat_Fla2.nex (3.206 Kb)
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Title Aiptasia-specific SCAR marker nucleotide sequence alignment.
Downloaded 24 times
Description 2,026 bp of concatenated nucleotide sequences from four Aiptasia-specific SCAR markers.
Download Aiptasia_SCAR_alignment.nex.nex (24.59 Kb)
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When using this data, please cite the original publication:

Thornhill DJ, Xiang Y, Pettay DT, Zhong M, Santos SR (2013) Population genetic data of a model symbiotic cnidarian system reveal remarkable symbiotic specificity and vectored introductions across ocean basins. Molecular Ecology 22(17): 4499-4515. http://dx.doi.org/10.1111/mec.12416

Additionally, please cite the Dryad data package:

Thornhill DJ, Xiang Y, Zhong M (2013) Data from: Population genetic data of a model symbiotic cnidarian system reveal remarkable symbiotic specificity and vectored introductions across ocean basins. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.r84n5
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