Data from: A global change in RNA polymerase II pausing during the Drosophila midblastula transition

 

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Title Supplemental File 1
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Description A spreadsheet summarizing our classification and analysis of pre-MBT and MBT gene groups. The first sheet gives an explanation for all column headings. The second sheet lists all data for all our annotated genes, including our ten custom transcripts. It includes the classifications into pre-MBT and MBT gene groups, the Pol II ChIP-seq enrichment values at the transcription start site (TSS) and transcription unit (TU) for all replicates, phastCon conservation scores, and the presence or absence of all core promoter motifs analyzed in this study, as well as the presence of the TATA element identified by de novo motif analysis.
Download supplemental_file_1.xlsx (7.628 Mb)
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When using this data, please cite the original publication:

Chen K, Johnston J, Shao W, Meier S, Staber C, Zeitlinger J (2013) A global change in RNA polymerase II pausing during the Drosophila midblastula transition. eLife 2: e00861. http://dx.doi.org/10.7554/eLife.00861

Additionally, please cite the Dryad data package:

Chen K, Johnston J, Shao W, Meier S, Staber C, Zeitlinger J (2013) Data from: A global change in RNA polymerase II pausing during the Drosophila midblastula transition. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.rv624
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