Data from: Transcriptomic analysis of the lesser spotted catshark (Scyliorhinus canicula) pancreas, liver and brain reveals molecular level conservation of vertebrate pancreas function

Mulley JF, Hargreaves AD, Hegarty MJ, Heller RS, Swain MT

Date Published: January 5, 2015

DOI: http://dx.doi.org/10.5061/dryad.s1f22

 

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Title Catshark three tissue assembly
Downloaded 41 times
Description Trinity assembly of RNA-Seq data derived from pancreas, liver and brain. Trimmed to remove contigs <300bp.
Download Sca_all_tissues300.fas (122.4 Mb)
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Title Catshark pancreas mapped transcripts
Downloaded 12 times
Description Transcripts mapped to the catshark pancreas, trimmed to remove contigs <300bp.
Download Additional _file_2_pancreas_only300.fasta (3.141 Mb)
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Title Catshark brain mapped transcripts
Downloaded 10 times
Description Transcripts mapped to the catshark brain, trimmed to remove contigs <300bp.
Download Additional_file_3_brain_only300.fasta (15.94 Mb)
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Title Catshark liver mapped transcripts
Downloaded 13 times
Description Transcripts mapped to the catshark liver, trimmed to remove contigs <300bp.
Download Additional_file_4_liver_only300.fasta (2.328 Mb)
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Title Catshark pancreas and brain mapped transcripts
Downloaded 6 times
Description Transcripts mapped to the catshark pancreas and brain, trimmed to remove contigs <300bp.
Download Additional_file_5_pancreas_brain300.fasta (4.468 Mb)
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Title Catshark pancreas and liver mapped transcripts
Downloaded 8 times
Description Transcripts mapped to the catshark pancreas and liver, trimmed to remove contigs <300bp.
Download Additional_file_6_pancreas_liver300.fasta (845.6 Kb)
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Title Catshark brain and liver mapped transcripts
Downloaded 5 times
Description Transcripts mapped to the catshark brain and liver, trimmed to remove contigs <300bp.
Download Additional_file_7_brain_liver300.fasta (2.639 Mb)
Details View File Details
Title Catshark pancreas, liver and brain mapped transcripts
Downloaded 8 times
Description Transcripts mapped to the catshark pancreas, liver and brain, trimmed to remove contigs <300bp.
Download Additional_file_8_pancreas_liver_brain300.fasta (11.29 Mb)
Details View File Details

When using this data, please cite the original publication:

Mulley JF, Hargreaves AD, Hegarty MJ, Heller RS, Swain MT (2014) Transcriptomic analysis of the lesser spotted catshark (Scyliorhinus canicula) pancreas, liver and brain reveals molecular level conservation of vertebrate pancreas function. BMC Genomics 15: 1074. http://dx.doi.org/10.1186/1471-2164-15-1074

Additionally, please cite the Dryad data package:

Mulley JF, Hargreaves AD, Hegarty MJ, Heller RS, Swain MT (2014) Data from: Transcriptomic analysis of the lesser spotted catshark (Scyliorhinus canicula) pancreas, liver and brain reveals molecular level conservation of vertebrate pancreas function. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.s1f22
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