Data from: Diabolical survival in Death Valley: recent pupfish colonization, gene flow, and genetic assimilation in the smallest species range on earth

Martin C, Crawford J, Turner B, Simons L

Date Published: January 5, 2016

DOI: http://dx.doi.org/10.5061/dryad.s30t4

 

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Title Phylogenetic analyses
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Description fasta, nexus, and xml files used for phylogenetic analyses.
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Title SNP matrices used for PCA STRUCTURE TREEMIX
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Description plink and structure data formats with various filtering criteria.
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Title dadi files for demographic analysis
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Description fasta and plink files used for dadi analysis of divergence time.
Download dadi files for demographic analysis.zip (427.2 Kb)
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When using this data, please cite the original publication:

Martin C, Crawford J, Turner B, Simons L (2016) Diabolical survival in Death Valley: recent pupfish colonization, gene flow, and genetic assimilation in the smallest species range on earth. Proceedings of the Royal Society B 283(1824): 20152334. http://dx.doi.org/10.1098/rspb.2015.2334

Additionally, please cite the Dryad data package:

Martin C, Crawford J, Turner B, Simons L (2016) Data from: Diabolical survival in Death Valley: recent pupfish colonization, gene flow, and genetic assimilation in the smallest species range on earth. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.s30t4
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