Data from: Adaptive divergence in wine yeasts and their wild relatives suggests a prominent role for introgressions and rapid evolution at non coding sites

Almeida P, Barbosa R, Bensasson D, Gonçalves P, Sampaio JP

Date Published: February 28, 2017

DOI: http://dx.doi.org/10.5061/dryad.s38jv

 

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Title Chromosome alignments of Wine and Mediterranean oaks populations
Downloaded 6 times
Description This is a gzip/tar compressed data archive containing the chromosome alignments of Wine and Mediterranean oaks populations in fastA format.
Download final-clean-wineAll-moAll.tgz (171.5 Mb)
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Title Alignments of FZF1 coding region
Downloaded 5 times
Description This is a gzip/tar compressed data archive with the alignments of the coding region of FZF1.
Download FZF1_alignments.tgz (6.722 Kb)
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Title Polymorphism analysis between the Mediterranean oak population and the wine population
Downloaded 8 times
Description This is a gzip/tar compressed data archive containing the results of sharedPoly from the libsequence analysis package (http://molpopgen.org/) (Thornton 2003). The archive contains results for each reference chromosome.
Download libsequence_sharedpoly.tgz (205.4 Kb)
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Title Variant Effect Predictor related files
Downloaded 4 times
Description This is a gzip/tar compressed data archive containing the input and output files for the Variant Effect Predictor (VEP) related analyses. It also has a RepeatMasker results file, based on the sacCer3 reference genome, and a perl script "mask.repeatmasker.pl" to mask/exclude the VEP results
Download VEP_input_output.tgz (2.519 Mb)
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When using this data, please cite the original publication:

Almeida P, Barbosa R, Bensasson D, Gonçalves P, Sampaio JP (2017) Adaptive divergence in wine yeasts and their wild relatives suggests a prominent role for introgressions and rapid evolution at noncoding sites. Molecular Ecology 26(7): 2167-2182. http://dx.doi.org/10.1111/mec.14071

Additionally, please cite the Dryad data package:

Almeida P, Barbosa R, Bensasson D, Gonçalves P, Sampaio JP (2017) Data from: Adaptive divergence in wine yeasts and their wild relatives suggests a prominent role for introgressions and rapid evolution at non coding sites. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.s38jv
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