Data from: Bats (Chiroptera: Noctilionoidea) challenge a recent origin of extant neotropical diversity

Rojas D, Warsi OM, Dávalos LM

Date Published: November 23, 2016

DOI: http://dx.doi.org/10.5061/dryad.s533p.2

 

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Title Supplementary Figures
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Description Figures S1–S9. Descriptions for the figures are contained in the file "Rojas_et_al_supplementary_material.docx"
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Title Rojas_et_al_supplementary_material
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Description Descriptions of figures S1–S9. Descriptions of Tables S1, S2 and S5. Tables S3, S4, S6 and S7.
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Title Rojas_et_al_Table_S1
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Description Species and GenBank accession numbers for each locus analyzed.
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Title Rojas_et_al_Table_S2
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Description Species, GenBank accession numbers, and collection number for each sequence generated for this study. Tissue samples were obtained from collections vouchered at the American Museum of Natural History (AMNH); the Field Museum of Natural History (FMNH); the Museo Universidad San Marcos (Lima, MUSM); the Museum of Texas Tech University (TTU, listed as TK); the Museum of Vertebrate Zoology (MVZ) of the University of California at Berkeley; the National Museum of Natural History (NMNH); and the Royal Ontario Museum (ROM). Stony Brook University (SBU) samples at the Dávalos lab are identified by collector number.
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Title Rojas_et_al_Table_S5
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Description Distribution of New World Noctilionoidea in Central and North America, South America, and the Antilles. Taxa were assigned to one or more of the three biogeographic regions based on their current distribution determined using the mammal distributions compiled by the IUCN (data downloaded on October 2013), and the literature since 2008. 1 = present, 0 = absent.
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Title Bayesian_majority-rule_trees
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Description Bayesian majority-rule consensus tree data of noctilionoids for each independent locus. Further details are provided as comments in each NEXUS file.
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Title timing_speciation
Downloaded 19 times
Description R script to quantify the number and timing of speciation events between extant sister species for the Quaternary and pre-Quaternary (Neogene + Paleogene) periods on a posterior sample of time-calibrated phylogenies. The code can be modified to accommodate older periods if necessary. The file "my_trees.nex" is a generic example that refers to any file including a posterior distribution of trees.
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When using this data, please cite the original publication:

Rojas D, Warsi O, Dávalos L (2016) Bats (Chiroptera: Noctilionoidea) challenge a recent origin of extant neotropical diversity. Systematic Biology 65(3): 432-448. http://dx.doi.org/10.1093/sysbio/syw011

Additionally, please cite the Dryad data package:

Rojas D, Warsi OM, Dávalos LM (2016) Data from: Bats (Chiroptera: Noctilionoidea) challenge a recent origin of extant neotropical diversity. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.s533p.2
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