Data from: Evidence for a host role in thermotolerance divergence between populations of the mustard hill coral (Porites astreoides) from different reef environments

Kenkel CD, Goodbody-Gringley G, Caillaud D, Davies SW, Bartels E, Matz MV

Date Published: May 17, 2013

DOI: http://dx.doi.org/10.5061/dryad.s706g

 

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Title Phenotypic Data
Downloaded 46 times
Description This file contains .csv files of raw trait measurements described in the paper (growth, bleaching, PAM) in addition to processed symbiont genotyping counts data (percent mapped reads and haplotype files). The accompanying R command file opens specific trait files and calls out columns in each to perform statistical analyses and generate figures as in the accompanying paper.
Download TraitData.zip (20.55 Kb)
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Title Host Genotyping Data (microsattelite genotypes)
Downloaded 37 times
Description This file contains the raw data files for both the full genotyping dataset (including individuals with 3rd alleles) as well as a STRUCTURE input file that is a subset of the data containing only those individuals with diploid genotypes at all loci as described in the paper. The R command files are for completing ploidy modeling as described in supplementary file S1.
Download CoralHostGenotyping.zip (10.77 Kb)
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Title ITS454rawreads
Downloaded 36 times
Description This file contains raw .fna files from 454 sequencing of the ITS2 locus as described in the paper. Each file contains reads for a single sample and > lines give the sample name for each file.
Download ITS454rawreads.zip (975.8 Kb)
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Title White Balanced Photographs of Coral Bleaching
Downloaded 33 times
Description This file contains pre- and post- experiment photographs of coral fragments that were analyzed to yield intensity measures indicative of bleaching as described in the paper.
Download Bleachpics_CorelExposureCorrectwithWhite.zip (52.75 Mb)
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When using this data, please cite the original publication:

Kenkel CD, Goodbody-Gringley G, Caillaud D, Davies SW, Bartels E, Matz MV (2013) Evidence for a host role in thermotolerance divergence between populations of the mustard hill coral (Porites astreoides) from different reef environments. Molecular Ecology 22(16): 4335-4348. http://dx.doi.org/10.1111/mec.12391

Additionally, please cite the Dryad data package:

Kenkel CD, Goodbody-Gringley G, Caillaud D, Davies SW, Bartels E, Matz MV (2013) Data from: Evidence for a host role in thermotolerance divergence between populations of the mustard hill coral (Porites astreoides) from different reef environments. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.s706g
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