Data from: Analysis of transposable elements in the genome of Asparagus officinalis from high coverage sequence data

Li S, Gao W, Zhao X, Dong T, Deng C, Lu L

Date Published: June 4, 2014

DOI: http://dx.doi.org/10.5061/dryad.s71t4

 

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Title scafSeq_TE_annotation.fasta
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Description Each sequence in the file represents a saffold produced via de novo assembly methods that RepeatMasker identified as a tranposable element. The header for each sequence includes a saffold number (e.g., scaffold20) followed by the annotation for that particular element (e.g., Retrotransposons/Ty3-gypsy ).
Download README.txt (1.314 Kb)
Download scafSeq_TE_annotation.fasta.zip (11.24 Mb)
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When using this data, please cite the original publication:

Li S, Gao W, Zhao X, Dong T, Deng C, Lu L (2014) Analysis of transposable elements in the genome of Asparagus officinalis from high coverage sequence data. PLoS ONE 9(5): e97189. http://dx.doi.org/10.1371/journal.pone.0097189

Additionally, please cite the Dryad data package:

Li S, Gao W, Zhao X, Dong T, Deng C, Lu L (2014) Data from: Analysis of transposable elements in the genome of Asparagus officinalis from high coverage sequence data. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.s71t4
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