Data from: A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat)

 

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Title Trimmed_Kidney_Reads
Downloaded 32 times
Description These are the trimmed fasta and qual files for each of the individual kidney libraries and all of the individual libraries together in a whole tissue file
Download Trimmed_Kidney_Reads.zip (132.3 Mb)
Download README.txt (427 bytes)
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Title Trimmed_Spleen_Reads
Downloaded 30 times
Description Trimmed .fasta and .qual files for each individual spleen library and for the total tissue library
Download Trimmed_Spleen_Reads.zip (114.8 Mb)
Download README.txt (427 bytes)
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Title Kidney_contigs
Downloaded 25 times
Description These are the .fasta and .ace files for all of the contigs from individual kidney assemblies as well as all of the kidney libraries assembled into one total 'kidney' assembly as described in the paper.
Download README.txt (427 bytes)
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Title Spleen_contigs
Downloaded 32 times
Description This file contains all of the spleen .fasta and .ace files for the contigs of all assemblies of individual spleen libraries as well as a total tissue 'spleen' library
Download Spleen_contigs.zip (28.97 Mb)
Download README.txt (427 bytes)
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Title Individual_Kidney_libraries_raw_reads
Downloaded 29 times
Description Individual .sff files for each of four individuals, for kidney
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Title Spleen_indiv_libraries_raw_reads
Downloaded 1 time
Description Individual .sff files for each of four individuals, for spleen
Download Spleen_indiv_libraries_raw_reads.zip (355.7 Mb)
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Title Total_kidney_raw_reads
Downloaded 29 times
Description Single .sff file with all reads from the four individual kidney libraries concatenated into one total tissue file
Download Total_kidney_raw_reads 1.zip (403.9 Mb)
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Title Spleen_total_raw_reads
Downloaded 28 times
Description Single .sff file with all reads from the four individual spleen libraries concatenated into one total tissue file
Download Spleen_total_raw_reads.zip (355.7 Mb)
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When using this data, please cite the original publication:

Marra NJ, Eo SH, Hale MC, Waser PM, DeWoody JA (2012) A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat). Comparative biochemistry and physiology. Part D, Genomics and proteomics 7(4): 328–339. http://dx.doi.org/10.1016/j.cbd.2012.07.001

Additionally, please cite the Dryad data package:

Marra NJ, Eo SH, Hale MC, Waser PM, DeWoody JA (2012) Data from: A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.sf654.2
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