Data from: Beauty in the eyes of the beholders: color vision is tuned to mate preference in the Trinidadian guppy (Poecilia reticulata)

Sandkam BA, Young CM, Breden F

Date Published: December 30, 2014

DOI: http://dx.doi.org/10.5061/dryad.sk6d5

 

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Title Gene Expression Relative to Average Housekeeping
Downloaded 8 times
Description This file is a cvs that has the level of expression of each of the 9 opsins, 1 rhodopsin and 3 housekeeping genes measured relative to the average of the 3 housekeeping genes (Bactin, COI, and MyosinHC). These numbers are for each individual along with information on the sex, standard length (SL), population (AHP- Aripo High Predation, ALP- Aripo Low Predation, MHP- Marianne High Predation, MLP- Marianne Low Predation), Watershed, Predation regime, Day of collection and Time of day collected (1- 07:30, 2- 10:30, 3- 13:30, 4- 16:30).
Download RelHouseFinal.txt (52.94 Kb)
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Title Opsin Gene Expression As Proportion of Total Opsin Expression
Downloaded 7 times
Description This file is a csv that has the level of expression of each of the 9 opsins measured as a proportion of total opsin expression. These numbers are for each individual along with information on the sex, standard length (SL), population (AHP- Aripo High Predation, ALP- Aripo Low Predation, MHP- Marianne High Predation, MLP- Marianne Low Predation), Watershed, Predation regime, Day of collection and Time of day collected (1- 07:30, 2- 10:30, 3- 13:30, 4- 16:30).
Download RelOpsinFinal.txt (38.64 Kb)
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Title Stats in R
Downloaded 10 times
Description This file has all stats run on this project and utilizes the data sets also available in Dryad.
Download Sandkam et al stats.R (64.28 Kb)
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Title Trinidad Environmental Parameters
Downloaded 4 times
Description This is a csv file that has the raw environmental parameters measured for each of the populations on each of the 3 days. These include: Temperature (C), Conductivity, Dissolved Oxygen (DO), pH, Total Dissolved Oxygen (TDS), Salinity, and Resistivity
Download Trinidad Environment.csv (716 bytes)
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Title Light Measures
Downloaded 5 times
Description This is a csv file of the measures of lambda p50 for each population measured on each of the 3 days.
Download lambdaP50.csv (222 bytes)
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Title Ala Ser 180 Frequency of LWS1
Downloaded 6 times
Description This file has the genotype data for LWS-1 for individuals sequenced as well as the population information.
Download Ala:Ser 180 Frequency.xlsx (58.05 Kb)
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Title LWS1 Alignment
Downloaded 8 times
Description Alignment of LWS-1 sequences in FASTA format. Individuals correspond with other data sets in this Dryad file and can be correlated with environmental data presented there.
Download LWS seq2.txt (71.41 Kb)
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When using this data, please cite the original publication:

Sandkam BA, Young CM, Breden F (2015) Beauty in the eyes of the beholders: color vision is tuned to mate preference in the Trinidadian guppy (Poecilia reticulata). Molecular Ecology 24(3): 596-609. http://dx.doi.org/10.1111/mec.13058

Additionally, please cite the Dryad data package:

Sandkam BA, Young CM, Breden F (2014) Data from: Beauty in the eyes of the beholders: color vision is tuned to mate preference in the Trinidadian guppy (Poecilia reticulata). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.sk6d5
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