Data from: Genetic basis for red coloration in birds

Lopes RJ, Johnson JD, Toomey MB, Ferreira MS, Araújo PM, Melo-Ferreira J, Andersson L, Hill GE, Corbo JC, Carneiro M

Date Published: May 25, 2016

DOI: http://dx.doi.org/10.5061/dryad.sm12c

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Individual SNP genotypes
Downloaded 22 times
Description Individual genotypes from 49 individuals from four breeds carrying the red factor (Lipochrome red, n = 35; Black red, n = 3; Portuguese Harlequin, n = 7; Agata red, n = 4), and 15 individuals from three breeds of yellow canary (Lipochrome yellow, n = 4; Harz roller, n = 4; Gibber italicus, n = 3) and one wild population (n = 4). We used 114 SNPs located in three independent genomic regions identified as outliers using differentiation and introgression statistics.
Download SNP Canary Genotypes.xlsx (42.87 Kb)
Details View File Details
Title De novo transcriptome assembly for (color) canaries
Downloaded 18 times
Description De novo assembly for each color phenotype transcriptome was performed. Here we provide a summary of assembly parameters and the two transcriptomes generated for the “Red” and “Yellow” individuals.
Download De_novo_transcriptome_assembly.zip (427.1 Mb)
Details View File Details

When using this data, please cite the original publication:

Lopes RJ, Johnson JD, Toomey MB, Ferreira MS, Araújo PM, Melo-Ferreira J, Andersson L, Hill GE, Corbo JC, Carneiro M (2016) Genetic basis for red coloration in birds. Current Biology 26(11): 1427–1434. http://dx.doi.org/10.1016/j.cub.2016.03.076

Additionally, please cite the Dryad data package:

Lopes RJ, Johnson JD, Toomey MB, Ferreira MS, Araújo PM, Melo-Ferreira J, Andersson L, Hill GE, Corbo JC, Carneiro M (2016) Data from: Genetic basis for red coloration in birds. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.sm12c
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: