Data from: Oceanographic currents and local ecological knowledge indicate, and genetics does not refute, a contemporary pattern of larval dispersal for the ornate spiny lobster, Panulirus ornatus in the South-East Asian archipelago

Dao HT, Smith-Keune C, Wolanski E, Jones CM, Jerry DR

Date Published: August 18, 2015

DOI: http://dx.doi.org/10.5061/dryad.sp418

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title THE ORNATE SPINY LOBSTER P. ORNATUS IN THE SOUTH-EAST ASIAN ARCHIPELAGO
Downloaded 4 times
Download Ornatus_Sampling_Figure_01_add_ScaleBar_a...py.tif (377.6 Kb)
Details View File Details
Title Table S1
Downloaded 75 times
Description Spatial distribution of control region haplotypes among Panulirus ornatus from six localities in the South-East Asian archipelago.
Download Table S1.docx (56.66 Kb)
Details View File Details
Title Table S2
Downloaded 67 times
Description Null allele frequencies in original dataset and after correction calculated by using FreeNA 3.0. Values above 10% are in bold.
Download Table S2.docx (15.45 Kb)
Details View File Details
Title Table S3
Downloaded 67 times
Description Summary table of analysis of molecular variance (AMOVA) describing the partitioning of genetic variation for six Panulirus ornatus populations in original dataset and after correction based on 10 microsatellite loci.
Download Table S3.docx (12.43 Kb)
Details View File Details
Title Table S4
Downloaded 71 times
Description Genetic differentiation between Panulirus ornatus from collection locations using pairwise FST for microsatellite loci in original dataset (lower value) and after correction (upper value). No significant value was found after correction using FDR.
Download Table S4.docx (13.47 Kb)
Details View File Details
Title Table S5
Downloaded 63 times
Description Migration rate (and standard errors) in each population that are migrants derived from other populations per generation.
Download Table S5.docx (13.44 Kb)
Details View File Details
Title GenotypingMicrosatellite
Downloaded 74 times
Description Genotyping Data and Diversity Indices of ten microsatellites
Download GenotypingMicrosatellite_OR.xlsx (180.7 Kb)
Details View File Details
Title GenotypingMicrosatellite_OR_CorrectedNullAllele
Downloaded 58 times
Description Genotyping Data and Diversity Indices of ten microsatellites after correcting null alleles
Download GenotypingMicrosatellite_OR_CorrectedNullA....xlsx (174.7 Kb)
Details View File Details
Title StructureResults_OR_10000-100000
Downloaded 66 times
Description Results from Structure Harvester and Barplot of P. ornatus populations with the burnin as 10% of run length (10,000 - 100,000)
Download StructureResults_OR_10000-100000.zip (505.5 Kb)
Details View File Details
Title BA3output_Ornatus
Downloaded 6 times
Description Output from BayesAss for P. ornatus populations
Download BA3output_Ornatus.txt (16.98 Kb)
Details View File Details
Title Ornatus_189ind_HocTanDao
Downloaded 8 times
Description Genotyping_mtDNAcontrolregion_189individual
Download Ornatus_189ind_HocTanDao.fasta (125.1 Kb)
Details View File Details
Title BestModel_G1.26_Ornatus_189ind_213poSite_2014jun03
Downloaded 60 times
Description Results from BestModel using MEGA6
Download BestModel_G1.26_Ornatus_189ind_213poSite_...03.xls (50.17 Kb)
Details View File Details
Title migrate_outfile
Downloaded 66 times
Description Initial output from Migrate ver 3.6.4
Download migrate_outfile.pdf (6.475 Mb)
Details View File Details
Title Arlequin_189ind_6pop_213site_2014sep10_main
Downloaded 65 times
Description Results using Arlequin based on 12,500 and 16,000 permutations
Download Alequin_12500&16000_permutations.zip (108.2 Kb)
Details View File Details

When using this data, please cite the original publication:

Dao HT, Smith-Keune C, Wolanski E, Jones CM, Jerry DR (2015) Oceanographic currents and local ecological knowledge indicate, and genetics does not refute, a contemporary pattern of larval dispersal for the ornate spiny lobster, Panulirus ornatus in the South-East Asian archipelago. PLOS ONE 10(5): e0124568. http://dx.doi.org/10.1371/journal.pone.0124568

Additionally, please cite the Dryad data package:

Dao HT, Smith-Keune C, Wolanski E, Jones CM, Jerry DR (2015) Data from: Oceanographic currents and local ecological knowledge indicate, and genetics does not refute, a contemporary pattern of larval dispersal for the ornate spiny lobster, Panulirus ornatus in the South-East Asian archipelago. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.sp418
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: