Data from: Vive la résistance: genome-wide selection against introduced alleles in invasive hybrid zones

Kovach RP, Hand BK, Hohenlohe PA, Cosart TF, Boyer MC, Neville HH, Muhlfeld CC, Amish SJ, Carim K, Narum SR, Lowe WH, Allendorf FW, Luikart G

Date Published: October 25, 2016

DOI: http://dx.doi.org/10.5061/dryad.ss035

 

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Title RAD_genos_Kovach_etal_2016
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Description The attached .xls file contains genotypes for the 9380 putatively diagnostic SNPs used in Kovach et al. 2016. Each row is a different individual. The first column is is population of origin for each individual. The following columns are genotypes for each locus. Locus names designate genomic position within the rainbow trout reference genome (see Hand et al. 2016): chr_chromosome#; chrUn - are loci on unanchored scaffolds; the final number is an identifier. Some RAD contigs have multiple SNPs. NA is missing data. At each locus, a 0 is a homozygote for the westslope cutthroat trout alleles, a 1 is a heterozygote (one rainbow trout allele and one westslope cutthroat trout allele) and a 2 is a rainbow trout homozygote.
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When using this data, please cite the original publication:

Kovach RP, Hand BK, Hohenlohe PA, Cosart TF, Boyer MC, Neville HH, Muhlfeld CC, Amish SJ, Carim K, Narum SR, Lowe WH, Allendorf FW, Luikart G (2016) Vive la résistance: genome-wide selection against introduced alleles in invasive hybrid zones. Proceedings of the Royal Society B 283(1843): 20161380. http://dx.doi.org/10.1098/rspb.2016.1380

Additionally, please cite the Dryad data package:

Kovach RP, Hand BK, Hohenlohe PA, Cosart TF, Boyer MC, Neville HH, Muhlfeld CC, Amish SJ, Carim K, Narum SR, Lowe WH, Allendorf FW, Luikart G (2016) Data from: Vive la résistance: genome-wide selection against introduced alleles in invasive hybrid zones. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.ss035
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