Data from: Molecular characterisation of trophic ecology within an island radiation of insect herbivores (Curculionidae: Entiminae: Cratopus).

 

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Title Alignment of all phased ITS2 individuals
Downloaded 8 times
Description Sample names are in the following format: indentifier_species_(collection site). The letters a and b suffixed to the identifier denote the alleles for the same individual. Homozygotes are entered twice. Individuals were phased using a combination of the program PHASE 2.1 as implemented in DNASP v5 and Indelligent v1.2 (available from: imperialis.inhs.illinois.edu/dmitriev/indel.asp‎).
Download ITS2_dryad.fasta (162.5 Kb)
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Title Genbank accession numbers
Downloaded 7 times
Description A table of genbank accession numbers for all specimens collected during this study. Additional columns are included indicating the species and sampling site for each specimen.
Download Kitson et al Genbank refs.xlsx (35.05 Kb)
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Title Plant trnL references and beetle derived variants
Downloaded 5 times
Description A fasta file of plant sequences amplified for this paper. Sequences are not aligned globally but beetle variants are aligned to each plant reference. The description section of each fasta sequence explains whether a beetle derived sequence was identified by comparison to a reference sequence or using SAP.
Download Plant references and beetle variants.fasta (15.11 Kb)
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When using this data, please cite the original publication:

Kitson JJN, Warren BH, Florens FBV, Baider C, Strasberg D, Emerson BC (2013) Molecular characterisation of trophic ecology within an island radiation of insect herbivores (Curculionidae: Entiminae: Cratopus). Molecular Ecology 22(21): 5441–5455. http://dx.doi.org/10.1111/mec.12477

Additionally, please cite the Dryad data package:

Kitson JJN, Warren BH, Florens FBV, Baider C, Strasberg D, Emerson BC (2013) Data from: Molecular characterisation of trophic ecology within an island radiation of insect herbivores (Curculionidae: Entiminae: Cratopus). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.ss427
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