Data from: Seasonality in the migration and establishment of H3N2 Influenza lineages with epidemic growth and decline

Zinder D, Bedford T, Baskerville EB, Woods RJ, Roy M, Pascual M

Date Published: December 31, 2014

DOI: http://dx.doi.org/10.5061/dryad.t120k

 

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Title hemagglutinin trees global
Downloaded 6 times
Description Hemagglutinin trees generated by BEAST for global analysis in NEXUS format
Download beastInputHAGlobal.trees (159.7 Mb)
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Title neuraminidase trees global
Downloaded 3 times
Description Neuraminidase trees generated by BEAST for global analysis in NEXUS format
Download beastInputNAGlobal.trees (154.4 Mb)
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Title hemagglutinin trees NA/OT
Downloaded 6 times
Description Hemagglutinin trees generated by BEAST for NA/OT analysis in NEXUS format
Download beastInputHA_NAOT.trees (293.5 Mb)
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Title neuraminidase trees NA/OT
Downloaded 12 times
Description Neuraminidase trees generated by BEAST for NA/OT analysis in NEXUS format
Download beastInputNA_NAOT.trees (364.7 Mb)
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Title hemagglutinin trees NC/SC/OT xml
Downloaded 15 times
Download beastInputHA_SCNC.xml (2.262 Mb)
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Title hemagglutinin trees NC/SC/OT
Downloaded 9 times
Description Hemagglutinin trees generated by BEAST for NC/SC/OT analysis in NEXUS format
Download beastInputHA_SCNC.trees (232.7 Mb)
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Title neuraminidase trees NC/SC/OT
Downloaded 1 time
Description Neuraminidase trees generated by BEAST for NC/SC/OT analysis in NEXUS format
Download beastInputNA_SCNC.trees (86.09 Mb)
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Title hemagglutinin trees global log file
Downloaded 2 times
Description Combined log files for hemagglutinin trees generated by BEAST for global analysis
Download beastInputHAGlobal.log (903.7 Kb)
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Title neuraminidase trees global log file
Downloaded 2 times
Description Combined log files for neuraminidase trees generated by BEAST for global analysis
Download beastInputNAGlobal.log (909.2 Kb)
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Title hemagglutinin trees global xml
Downloaded 10 times
Description BEAST xml file used to generate hemagglutinin trees for global analysis (a single chain)
Download beastInputHAGlobal.xml (1.971 Mb)
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Title neuraminidase trees global xml
Downloaded 10 times
Description BEAST xml file used to generate neuraminidase trees for global analysis (a single chain)
Download beastInputNAGlobal.xml (1.879 Mb)
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Title hemagglutinin trees NC/SC/OT log files
Downloaded 2 times
Description Combined log files for hemagglutinin trees generated by BEAST for NC/SC/OT analysis
Download beastInputHA_SCNC.log (902.7 Kb)
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Title neuraminidase trees NC/SC/OT log file
Downloaded 4 times
Description Combined log files for neuraminidase trees generated by BEAST for NC/SC/OT analysis
Download beastInputNA_SCNC.log (900.4 Kb)
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Title neuraminidase trees NC/SC/OT xml file
Downloaded 8 times
Download beastInputNA_SCNC.xml (382.9 Kb)
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Title neuraminidase trees NA/OT xml
Downloaded 10 times
Download beastInputNA_NAOT.xml (1.825 Mb)
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Title Neuraminidase trees NA/OT log
Downloaded 3 times
Download beastInputNA_NAOT.log (3.607 Mb)
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Title hemagglutinin trees NA/OT xml
Downloaded 11 times
Download beastInputHA_NAOT.xml (2.609 Mb)
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When using this data, please cite the original publication:

Zinder D, Bedford T, Baskerville EB, Woods RJ, Roy M, Pascual M (2014) Seasonality in the migration and establishment of H3N2 Influenza lineages with epidemic growth and decline. BMC Evolutionary Biology 14: 272. http://dx.doi.org/10.1186/s12862-014-0272-2

Additionally, please cite the Dryad data package:

Zinder D, Bedford T, Baskerville EB, Woods RJ, Roy M, Pascual M (2014) Data from: Seasonality in the migration and establishment of H3N2 Influenza lineages with epidemic growth and decline. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.t120k
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