Data from: Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome

Hodkinson BP, Gottel NR, Schadt CW, Lutzoni F

Date Published: June 29, 2011

DOI: http://dx.doi.org/10.5061/dryad.t99b1

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Lichen-Associated Bacterial 16S Sequences & Analysis Files
Downloaded 536 times
Description The archive contains 5 major elements: [Clon16SFinal.fasta - A fasta-formatted file containing all cloned sequences from the order Rhizobiales generated as part of this study] [FIGS1.pdf - An image of a phylogeny of all cloned sequences from the order Rhizobiales generated as part of this study (the methodology for generating the figure is outlined in the associated publication)] [HodkinsonLichen16S_454_raw_data_archive - A directory containing archived fna + qual files of raw sequence data with associated oligos files (used for processing with Mothur 1.15)] [454_clean - A directory containing the cleaned sequence data set (in the form of a .fasta and a .groups file) after quality checks performed using Mothur 1.15] [Supporting_Information - A directory containing all of the supplementary files referenced in the text of the associated publication along with instructions for using the various scripts written for this study, all found within a system of descriptively-titled sub-directories]
Download Hodkinson_et_al_EMI_Dryad.zip (108.7 Mb)
Details View File Details

When using this data, please cite the original publication:

Hodkinson BP, Gottel NR, Schadt CW, Lutzoni F (2011) Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome. Environmental Microbiology 14(1): 147-161. http://dx.doi.org/10.1111/j.1462-2920.2011.02560.x

Additionally, please cite the Dryad data package:

Hodkinson BP, Gottel NR, Schadt CW, Lutzoni F (2011) Data from: Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.t99b1
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: