Data from: Global biodiversity assessment and hyper-cryptic species complexes: more than one species of elephant in the room?

Adams M, Raadik TA, Burridge CP, Georges A

Date Published: March 7, 2014

DOI: http://dx.doi.org/10.5061/dryad.tk043

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Adams_etal_Syst_Biol_unique_cytb_haplotypes
Downloaded 31 times
Description MEGA file of n=277 unique cytb haplotypes (271 ingroup and 6 outgroup sequences for 602bp),
Download Adams_etal_Syst_Biol_unique_cytb_haplotypes.meg (237.3 Kb)
Details View File Details
Title Adams_etal_Syst_Biol_Supplemental_Table_1
Downloaded 78 times
Description TABLE 1. Locality, collection and sample size information for mountain galaxias specimens used in the molecular studies or prepared and assessed for the morphological studies. Sites arranged according to species, Drainage Division (DD) and River Basin (RB) (AWRC 1976). Alloz = Allozymes; Cytb = Cytochrome-b sequenced; Morph – Morphometrics; Meris – Meristics. Sample sizes for each morphological assessment include the individuals used in the final analyses, plus outliers, plus those subsequently used to assess the geographic range of each species. Taxon codes follow Table 1 and Figure 5. Where provided, sites codes match those of Raadik (2011). Sites were assigned to three regions for some of the allozyme PCoAs, namely ‘northern’ (all sites within DD 2, RB 3–17 or DD 4, RB 10–22), ‘central’ (all sites within DD 2, RB 18–35 or DD 4, RB 1–12), or ‘western’ (all sites within DD 4, RB 26 or DD 5).
Download Adams_etal_Syst_Biol_Supplemental_Table_1.doc (1.174 Mb)
Details View File Details
Title Adams_etal_Syst_Biol_Supplemental_Table_2_allozyme_raw_data
Downloaded 58 times
Description Individual allozyme genotypes for n=838 mountain galaxias at 54 allozyme loci. Gel# = individual allozyme code; Taxon/DD/RB/site no = as per Supplemental Table 1; Locus abbreviations as outlined in main text.
Download Adams_etal_Syst_Biol_Supplemental_Table_2...ta.xls (638.9 Kb)
Details View File Details
Title Adams_etal_Syst_Biol_Supplemental_Table_3
Downloaded 44 times
Description TABLE 3. Allozyme frequencies for the 15 diagnosable candidate species, as identified using stepwise PCoA. Alleles with a frequency of less than 0.5 % in any taxon are not shown. For polymorphic loci, the frequencies of all but the rarer/rarest alleles are expressed as percentages and shown as superscripts (allowing the frequency of each rare allele to be calculated by subtraction from 100 %). Alleles not separated by a comma all shared the frequency indicated. Taxon codes follow Table 1 and Figure 3. A dash indicates no genotype was assignable at this locus.
Download Adams_etal_Syst_Biol_Supplemental_Table_3.doc (146.9 Kb)
Details View File Details
Title Adams_etal_Syst_Biol_Supplemental_Table_4
Downloaded 47 times
Description TABLE 4. Total number of diagnostic ‘characters’ among the 15 candidate species across both the allozyme and morphological datasets. The morphometric and meristic datasets were each only counted as one ‘super-character’, based on the outcomes of our multivariate analyses. In all cases, multiple univariate morphological characters were able to differentiate pairwise combinations of taxa (Raadik 2011).
Download Adams_etal_Syst_Biol_Supplemental_Table_4.doc (77.82 Kb)
Details View File Details
Title Adams_etal_hyper-cryptic_olidus_Syst_Biol_Supplementary_Figures_R1
Downloaded 57 times
Description Powerpoint file containing Supplemental Figures 1-6. Each figure is individually captioned.
Download Adams_etal_hyper-cryptic_olidus_Syst_Biol...R1.ppt (840.7 Kb)
Details View File Details
Title Adams_etal_hyper-crpytic_olidus_Syst_Biol_Supplementary_Text
Downloaded 40 times
Description Supplementary Text 1 and 2, providing additional details of the morphological analyses undertaken.
Download Adams_etal_hyper-crpytic_olidus_Syst_Biol...xt.doc (41.47 Kb)
Details View File Details

When using this data, please cite the original publication:

Adams M, Raadik TA, Burridge CP, Georges A (2014) Global biodiversity assessment and hyper-cryptic species complexes: more than one species of elephant in the room? Systematic Biology 63(4): 518-533. http://dx.doi.org/10.1093/sysbio/syu017

Additionally, please cite the Dryad data package:

Adams M, Raadik TA, Burridge CP, Georges A (2014) Data from: Global biodiversity assessment and hyper-cryptic species complexes: more than one species of elephant in the room? Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.tk043
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: