Data from: Multi-locus sequence data illuminate demographic drivers of Pleistocene speciation in semi-arid southern Australian birds (Cinclosoma spp.)

Dolman G, Joseph L

Date Published: October 13, 2016

DOI: http://dx.doi.org/10.5061/dryad.v033k

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Cinclosoma Coordinates
Downloaded 7 times
Description Geneland Infile: Coordinates file has 2 columns for spatial coordinates (long, lat), with no missing data, comma delimited
Download Cinclosoma Coordinates.csv (602 bytes)
Details View File Details
Title Cinclosoma _Codominant
Downloaded 7 times
Description Geneland Infile: Diploid genotype file for has 22 columns (11 nulear loci), sequencing data converted to allelic data, missing data= NA, comma delimited.
Download Cinclosoma _Codominant.csv (1.523 Kb)
Details View File Details
Title Cinclosoma_IM_in
Downloaded 5 times
Description IMa2 infile: 2 populations (Cinclosoma castanotum and Cinclosoma clarum), 11 nuclear and 1 mtDNA locus.
Download Cinclosoma_IM_in.txt (229.3 Kb)
Details View File Details
Title Cinclosoma_noST_SB_in
Downloaded 5 times
Description IMa2 infile with putative C. clarum fordianum removed: 2 populations (Cinclosoma castanotum and Cinclosoma clarum), 11 nuclear and 1 mtDNA locus.
Download Cinclosoma_noST_SB_in.txt (218.6 Kb)
Details View File Details
Title castanotum_EBSP
Downloaded 4 times
Description EBSP xml infile for Cinclosoma castanotum run in Beast v1.7.5. EBSP run uses mtDNA rate and one nuclear loci. This was chosen based on locus closest to average of all loci. All loci (except one) are within the bounds of the Ellegren (2013) Annual Review of Ecology and Systematics. The one outside is only a tiny fraction lower.
Download castanotum_EBSP.xml (126.6 Kb)
Details View File Details
Title clarum_noST_SB_EBSP
Downloaded 4 times
Description EBSP xml infile for Cinclosoma clarum (putative Cinclosoma clarum fordianum removed) run in Beast v1.7.5. EBSP run uses mtDNA rate and one nuclear loci. This was chosen based on locus closest to average of all loci. All loci (except one) are within the bounds of the Ellegren (2013) Annual Review of Ecology and Systematics. The one outside is only a tiny fraction lower.
Download clarum_noST_SB_EBSP.xml (257.1 Kb)
Details View File Details

When using this data, please cite the original publication:

Dolman G, Joseph L (2016) Multi-locus sequence data illuminate demographic drivers of Pleistocene speciation in semi-arid southern Australian birds (Cinclosoma spp.). BMC Evolutionary Biology 16: 226. http://dx.doi.org/10.1186/s12862-016-0798-6

Additionally, please cite the Dryad data package:

Dolman G, Joseph L (2016) Data from: Multi-locus sequence data illuminate demographic drivers of Pleistocene speciation in semi-arid southern Australian birds (Cinclosoma spp.). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.v033k
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: